From c6610342d4c7823f9465b8d44c4acee6f3c51fae Mon Sep 17 00:00:00 2001
From: Jeremy Fee <jmfee@usgs.gov>
Date: Thu, 4 Aug 2016 09:30:07 -0600
Subject: [PATCH] Initial dockerfile

---
 .dockerignore          |  4 +++
 Dockerfile             | 53 +++++++++++++++++++++++++++++++++++++
 docs/install_docker.md | 59 ++++++++++++++++++++++++++++++++++++++++++
 3 files changed, 116 insertions(+)
 create mode 100644 .dockerignore
 create mode 100644 Dockerfile
 create mode 100644 docs/install_docker.md

diff --git a/.dockerignore b/.dockerignore
new file mode 100644
index 000000000..14a369920
--- /dev/null
+++ b/.dockerignore
@@ -0,0 +1,4 @@
+.DS_Store
+node_modules
+*.pyc
+conf
diff --git a/Dockerfile b/Dockerfile
new file mode 100644
index 000000000..9e5d035aa
--- /dev/null
+++ b/Dockerfile
@@ -0,0 +1,53 @@
+FROM debian:jessie
+
+MAINTAINER Jeremy Fee <jmfee@usgs.gov>
+LABEL usgs.geomag-algorithms.version=0.2.0
+
+
+# update os
+RUN apt-get update --fix-missing && \
+    apt-get install -y --no-install-recommends \
+        bzip2 \
+        ca-certificates \
+        curl \
+        gcc \
+        libcurl4-gnutls-dev \
+        libglib2.0-0 \
+        libgnutls28-dev \
+        libsm6 \
+        libxext6 \
+        libxrender1 && \
+    apt-get clean
+
+
+ENV PATH /conda/bin:$PATH
+
+# install conda and install obspy
+RUN echo 'export PATH=/conda/bin:$PATH' > /etc/profile.d/conda.sh && \
+    curl https://repo.continuum.io/miniconda/Miniconda2-latest-Linux-x86_64.sh \
+        -o ~/miniconda.sh && \
+    /bin/bash ~/miniconda.sh -b -p /conda && \
+    rm ~/miniconda.sh && \
+    conda config --add channels obspy && \
+    conda install --yes jupyter obspy && \
+    conda clean -i -l -t -y && \
+    pip install pycurl
+
+
+# copy library (ignores set in .dockerignore)
+COPY . /geomag-algorithms
+
+
+RUN pip install /geomag-algorithms && \
+    mkdir /notebooks
+
+
+WORKDIR /geomag-algorithms
+EXPOSE 80
+CMD /bin/bash -c " \
+    exec jupyter notebook \
+        --ip='*' \
+        --notebook-dir=/notebooks \
+        --no-browser \
+        --port=80 \
+    "
diff --git a/docs/install_docker.md b/docs/install_docker.md
new file mode 100644
index 000000000..27022767f
--- /dev/null
+++ b/docs/install_docker.md
@@ -0,0 +1,59 @@
+## Docker
+https://www.docker.com/
+
+Docker containers bundle all dependencies needed to use geomag-algorithms.
+The container includes a Jupyter Notebook server for interactive development.
+
+> Docker images are built using the `Dockerfile` at the root of this project.
+
+
+### Create a new docker container
+
+The following command creates and starts a container.
+```
+docker run -d --name geomagio -p 8000:80 usgs/geomag-algorithms
+```
+
+- `-d` runs container in the background
+- `-name geomagio` assigns the name `geomagio`
+- `-p 8000:80` forwards system port `8000` to container port `80`
+- `usgs/geomag-algorithms:latest` refers to the
+  latest version of the geomag-algorithms docker image
+
+  > Notebooks are stored in the container in the directory `/notebooks`
+
+
+### Use the container
+
+- Start a stopped container:
+```
+docker start geomagio
+```
+
+- Run an interactive python prompt
+```
+docker exec -it geomagio python
+```
+
+- Use the Jupyter Notebook server
+```
+open http://localhost:8000/
+```
+
+- Use the `geomag.py` command line interface
+```
+docker exec -it geomagio geomag.py \
+    --inchannels H E Z F \
+    --input edge \
+    --interval minute \
+    --observatory BOU \
+    --output iaga2002 \
+    --output-stdout \
+    --starttime 2016-07-04T00:00:00Z \
+    --endtime 2016-07-04T23:59:00Z
+```
+
+- Stop a running container:
+```
+docker stop geomagio
+```
-- 
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