Initial commit

data-raw/decorative/facilities.geojson

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data-raw/decorative/inl.geojson

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data-raw/decorative/misc-labels.tsv

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+169400	203749	BLAINE	0.8	#F0F0F0	1	90	FALSE	1
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+178687	229531	Big Lost River	0.6	#3399CC	3	-40	TRUE	1
+205095	230710	Big Lost River	0.6	#3399CC	3	30	TRUE	2
+202705	229445	Big Lost River	0.6	#3399CC	3	40	TRUE	2
+215718	252187	Big Lost River\nSinks	0.6	#3399CC	3	0	TRUE	1
+188000	219062	Big Lost River\nSpreading Areas	0.6	#3399CC	3	0	TRUE	1
+194625	263437	Little Lost River	0.6	#3399CC	3	-60	TRUE	1
+210562	282812	Birch Creek	0.6	#3399CC	3	-60	TRUE	1
+255600	263900	Camas\nCreek	0.6	#3399CC	3	20	TRUE	1
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+204570	229062	Lincoln Blvd	0.6	#666666	3	88	FALSE	2
+204643	231648	Lincoln Blvd	0.6	#666666	3	88	FALSE	2
+204150	230850	Monroe Blvd	0.6	#666666	3	-28	FALSE	2
+204874	230023	Cleveland\nBlvd	0.6	#666666	3	0	FALSE	2
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+181031	232499	Butte City	0.5	#333333	1	0	TRUE	1
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data-raw/decorative/site-labels.tsv

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+1	433250112565601	USGS 128
+4	433520112572601	MTR TEST
+4	433522112582101	Site 19
+1	433521112573801	TRA 1
+3	433522112573501	TRA 3
+1	433521112574201	TRA 4
+2	433506112572301	TRA Disposal
+1	433500112572502	USGS 58
+1	433447112574501	USGS 65
+2	433425112573201	USGS 76
+1	433505112581901	USGS 79
+4	433042112535101	Badging Facility
+3	433204112562001	CFA 1
+2	433144112563501	CFA 2
+3	433216112571001	CFA LF 3-9
+3	433216112563301	CFA LF 2-10
+1	433058112572201	USGS 127
+4	434126112550701	USGS 12
+1	433937112515401	USGS 17
+4	433807112551501	USGS 97
+1	433657112563601	USGS 98
+4	433705112552101	USGS 99
+2	433853112551601	USGS 102
+2	433716112563601	WS for INEL-1
+3	433008113021801	RWMC M3S
+1	433023113014801	RWMC M7S
+1	433058113010401	RWMC M11S
+2	433118112593401	RWMC M12S
+2	433037113002701	RWMC M13S
+4	433052113025001	RWMC M14S
+2	433002113021701	RWMC Production
+3	433013113024201	USGS 87
+1	432940113030201	USGS 88
+1	433005113032801	USGS 89
+1	432955113025901	USGS 117
+1	432945113023401	USGS 119
+3	432919113031501	USGS 120
+2	435152112443101	ANP 6
+1	434856112400001	ANP 9
+2	435038112453401	Noname 1 (TAN Exploration)
+2	434941112454201	PSTF Test
+1	434915112443901	USGS 7
+1	435212112394001	USGS 26
+4	433509112384801	Arbor Test 1
+1	433223112470201	Area 2
+4	432638112484101	Atomic City
+1	433051113002601	EBR 1
+3	433256113002501	Highway 3
+4	433449112523101	NPR Test
+4	435419112453101	P and W 2
+4	433617112542001	Site 4
+4	433123112530101	Site 9
+1	434334112463101	Site 14
+1	434027112575701	Site 17
+4	433252112520301	SPERT 1
+3	432700112470801	USGS 1
+1	433320112432301	USGS 2
+1	434657112282201	USGS 4
+3	433543112493801	USGS 5
+1	434031112453701	USGS 6
+1	433121113115801	USGS 8
+1	432740113044501	USGS 9
+1	432336113064201	USGS 11
+1	432019112563201	USGS 14
+2	434234112551701	USGS 15
+1	434540112440901	USGS 18
+1	434426112575701	USGS 19
+2	433422113031701	USGS 22
+1	434055112595901	USGS 23
+1	434851112321801	USGS 27
+1	434407112285101	USGS 29
+1	434625112342101	USGS 31
+1	434444112322101	USGS 32
+1	433023112561501	USGS 83
+3	432935113080001	USGS 86
+1	433503112400701	USGS 100
+2	433255112381801	USGS 101
+1	432856112560801	USGS 104
+1	432959112593101	USGS 106
+1	432942112532801	USGS 107
+1	432701113025601	USGS 109
+3	432717112501502	USGS 110A
+1	432307112583101	USGS 124
+1	432602113052801	USGS 125
+3	435529112471301	USGS 126A
+1	435529112471401	USGS 126B
+2	433409112570515	Middle 2050A
+2	433217113004909	Middle 2051
+2	433217113004906	Middle 2051
+2	433217113004903	Middle 2051
+2	433217113004901	Middle 2051
+1	432714112560712	USGS 103
+1	432714112560708	USGS 103
+1	432714112560704	USGS 103
+1	432714112560702	USGS 103
+1	432703113001815	USGS 105
+1	432703113001811	USGS 105
+1	432703113001807	USGS 105
+1	432659112582610	USGS 108
+1	432659112582606	USGS 108
+1	432659112582602	USGS 108
+2	433036112581815	USGS 131A
+2	433036112581810	USGS 131A
+2	433036112581806	USGS 131A
+2	433036112581803	USGS 131A
+1	432906113025018	USGS 132
+1	433605112554312	USGS 133
+3	433611112595819	USGS 134
+3	433611112595815	USGS 134
+1	432753113093609	USGS 135
+3	432701113025807	USGS 137A
+3	432701113025805	USGS 137A
+3	432701113025803	USGS 137A
+3	432701113025801	USGS 137A

data-raw/detection-limits.tsv

+srsname	parm_cd	parameter_units	lab_det_lim_va	sdate	reference
+Tritium	07000	pCi/L	500	1949-01-16	Bartholomay and others (2003, table 9)
+Tritium	07000	pCi/L	200	2003-04-01	Bartholomay and others (2014, table D1)
+Strontium-90	13501	pCi/L	5	1949-01-16	Bodnar and Percival (1982)
+Strontium-90	13501	pCi/L	2	1998-07-31	Bartholomay and others (2014, table D1)
+Plutonium-238	22012	pCi/L	0.2	1949-01-16	Bartholomay and others (2014, table D1)
+Cesium-137	28401	pCi/L	60	1949-01-16	Bartholomay and others (2014, table D1)
+Alpha particle	63018	pCi/L	3	1949-01-16	Bartholomay and others (2014, table D1)
+Beta particle	80049	pCi/L	2	1949-01-16	Bartholomay and others (2014, table D1)

data-raw/perched-wells.tsv

+site_no	site_nm
+433459112572601	CWP 1
+433458112572401	CWP 2
+433455112572501	CWP 3
+433454112572601	CWP 4
+433455112572901	CWP 5
+433456112573301	CWP 6
+433458112573201	CWP 7
+433500112573001	CWP 8
+433500112572901	CWP 9
+433321112581501	ICPP-MON-V-200
+433456112572001	PW-8
+433500112575401	PW-9
+433503112573401	USGS 53
+433503112572801	USGS 54
+433508112573001	USGS 55
+433509112573501	USGS 56
+433456112571901	USGS 60
+433453112571601	USGS 61
+433446112570701	USGS 62
+433455112574001	USGS 63
+433436112564801	USGS 66
+433516112573901	USGS 68
+433450112573001	USGS 69
+433504112571001	USGS 70
+433439112571501	USGS 71
+433519112574601	USGS 72
+433502112575401	USGS 73
+433413112573501	USGS 78
+433000113025301	USGS 92

data-raw/qwdata/README.md

+# QWDATA
+
+The National Water Information System (NWIS) is a distributed database for the storage and retrieval of water data collected at sites in the United States (U.S. Geological Survey, 2019). The Water-Quality System (QWDATA) is a subsystem of NWIS that stores water-quality data. This document provides instructions for accessing data collected through activities at well sites in the in the U.S. Geological Survey (USGS) water-quality aquifer monitoring network, Idaho National Laboratory and vicinity, Idaho. Instructions may be entered interactively through a series of menus, or scripted and executed from the command line. Access to the QWDATA software is limited to U.S. Geological Survey employees—contact your database administrator or IT specialist for details.
+
+QWDATA software is run remotely using a secure shell (SSH) client (such as [PuTTY](http://www.chiark.greenend.org.uk/~sgtatham/putty/)). Software input files are summarized in the following table:
+
+| File name                        | Data description |
+|:---------------------------------|:-----------------|
+| [alphacodes.txt](alphacodes.txt) | List of alpha parameter codes used in QWDATA. These codes identify the fields (columns) to include in the output data table (such as date, time, and parameter value). See the QWDATA user's manual ([Dupré and others, 2013](#references), appendix A, table 13, p. 227--231) for code descriptions. |
+| [pcodes.txt](pcodes.txt)         | List of USGS parameter codesto be tabled. These codes are used to identify the constituent and the units of measure. The codes are documented in the "[NWIS Parameter Code Dictionary](https://nwis.waterdata.usgs.gov/usa/nwis/pmcodes)". |
+| [siteids.txt](siteids.txt)       | List of USGS site information to be tabled. Specified in a fixed-column format: (1-5) agency code; (6-20) left-justified site number. |
+| [commands.txt](commands.txt)     | List of QWDATA menu commands, see [Interactive](#interactive) instructions for command descriptions. This file is only applicable for the [Scripted](#scripted) instructions. |
+
+QWDATA requires read access for input files, therefore, a copy of each file must be placed on the remote computer under your working directory (such as `\\nwisid\home\jfisher`). Two output files are created by QWDATA and summarized in the following table:
+
+| File name                  | Data description |
+|:---------------------------|:-----------------|
+| [output.tsv](output.tsv)   | Water-quality data retrieved from the environmental and quality-assurance databases on June 6, 2019 ([U.S. Geological Survey, 2016](#references)). Data is in a columnar tab-delimited format that uses one row (line) for each parameter. |
+| records.txt                | List of sample record numbers to be tabled. This is a temporary file created during an intermediate step of the data retrieval process. |
+
+## Scripted
+
+QWDATA commands are stored in the [commands.txt](commands.txt) text file. To read and execute these commands, enter `qwdata < commands.txt` at the command prompt.
+
+![Image](images/qwdata-D01.png)
+
+## Interactive
+
+To start QWDATA type `qwdata` at the command prompt and the main menu will appear.
+
+![Image](images/qwdata-A01.png)
+
+Ensure that output files from a previous QWDATA run are removed by entering `rm records.txt` followed by a carriage return `<CR>`.
+
+![Image](images/qwdata-A02.png)
+
+And entering `rm output.tsv` followed by a `<CR>`.
+
+![Image](images/qwdata-A03.png)
+
+
+Select the **Data Output** processing routine (option 4) from the main menu by entering `4`.
+
+![Image](images/qwdata-A04.png)
+
+Select the multiple database retrieval option by entering `2`.
+
+![Image](images/qwdata-B01.png)
+
+Enter `01` for the environmental database and `10` for the Idaho quality-assurance database.
+
+![Image](images/qwdata-B02.png)
+
+Retrieve records for specific sites.
+Access the site numbers contained within a file by entering `1`.
+
+![Image](images/qwdata-B03.png)
+
+Enter the `siteids.txt` file name for both databases.
+
+![Image](images/qwdata-B04.png)
+
+Choose not to specify conditions that limit data retrieval by toggle through each of the items and enter a final `<CR>` to continue.
+
+![Image](images/qwdata-B05.png)
+
+Choose not to save a list of sites that have data in the environmental database by entering `N`.
+
+![Image](images/qwdata-B06.png)
+
+Choose not to save a list of sites that have data in the quality-assurance database by entering `N`.
+
+![Image](images/qwdata-B07.png)
+
+Choose not to sort the data by entering `N`.
+
+![Image](images/qwdata-B08.png)
+
+Retrieved record numbers (not the water-quality data) are written to the working directory on the remote computer. Enter `records.txt` for the output filename.
+
+![Image](images/qwdata-B09.png)
+
+Select to output data to a text file (flat file) in a columnar format that uses one row (line) for each parameter by entering `6`.
+
+![Image](images/qwdata-C01.png)
+
+Select a tab delimiter for the output file format by entering `2`.
+
+![Image](images/qwdata-C02.png)
+
+Enter `records.txt` for the name of the file containing record numbers (this is output from a previous step). Retrieved water-quality data will be written to the working directory on the remote computer. Enter `output.tsv` for the output filename.
+
+![Image](images/qwdata-C03.png)
+
+Access the alpha (result-level) parameter codes contained within a file by entering `2`. Enter `alphacodes.txt` for the name of the file containing the list of alpha parameter codes.
+
+![Image](images/qwdata-C04.png)
+
+Select option for controlling the rounding of result values by entering `2`.
+
+![Image](images/qwdata-C05.png)
+
+Choose to output analysis value as stored by entering `N`.
+
+![Image](images/qwdata-C06.png)
+
+Select parameters to include in the output table by entering `5`.
+
+![Image](images/qwdata-C07.png)
+
+Access the parameter codes contained within a file by entering `3`. Enter `pcodes.txt` for the name of the file containing the list of parameter codes.
+
+![Image](images/qwdata-C08.png)
+
+Select option for controlling the accessibility of restricted data records by entering `8`.
+
+![Image](images/qwdata-C09.png)
+
+Choose to retrieve all data records by entering `N`.
+
+![Image](images/qwdata-C10.png)
+
+Enter `<CR>` to leave the current menu.
+
+![Image](images/qwdata-C11.png)
+
+Choose to not run the program again by entering `N`.
+
+![Image](images/qwdata-C12.png)
+
+Exit the software by entering `99`.
+
+![Image](images/qwdata-C13.png)
+
+## References
+
+Dupr&eacute;, D.H, Scott, J.C., Clark, M.L., Canova, M.G, and Stoker, Y.E., 2013, User's manual for the National Water Information System of the U.S. Geological Survey: Water-Quality System, Version 5.0: U.S. Geological Survey Open-File Report 2013–1054, 730 p., http://pubs.usgs.gov/of/2013/1054. Supercedes Open-File Report 2006–1145.
+
+U.S. Geological Survey, 2019, National Water Information System—Water-Quality System data retrieval program, accessed June 11, 2019.
+
+U.S. Geological Survey, 2019, National Water Information System—web services, accessed June 11, 2019, at https://doi.org/10.5066/F7P55KJN.

data-raw/qwdata/alphacodes.txt

+SNAME
+STAID
+DATES
+TIMES
+MEDIM
+DBNUM
+ANENT
+PLNAM
+PCODE
+REMRK
+VALUE
+LSDEV
+UNITS
+DQIND
+RPLEV
+RLTYP
+STYPE
+ANENT
+METHD
+ASTAT
+RCMLB

data-raw/qwdata/commands.txt

+rm records.txt
+
+rm output.tsv
+
+4
+2
+01
+10
+
+
+1
+siteids.txt
+siteids.txt
+
+
+
+
+
+
+
+
+
+N
+N
+N
+records.txt
+6
+2
+records.txt
+output.tsv
+2
+alphacodes.txt
+2
+N
+5
+3
+pcodes.txt
+8
+N
+
+N
+99