diff --git a/DISCLAIMER.md b/DISCLAIMER.md new file mode 100644 index 0000000000000000000000000000000000000000..9a7187331bc47a0f99039204862a53f4ec51a84b --- /dev/null +++ b/DISCLAIMER.md @@ -0,0 +1,4 @@ +Disclaimer +========== + +This software has been approved for release by the U.S. Geological Survey (USGS). Although the software has been subjected to rigorous review, the USGS reserves the right to update the software as needed pursuant to further analysis and review. No warranty, expressed or implied, is made by the USGS or the U.S. Government as to the functionality of the software and related material nor shall the fact of release constitute any such warranty. Furthermore, the software is released on condition that neither the USGS nor the U.S. Government shall be held liable for any damages resulting from its authorized or unauthorized use. diff --git a/LICENSE.md b/LICENSE.md new file mode 100644 index 0000000000000000000000000000000000000000..7dbcd7cea347980e42dfd4ec5e341e79ce03fc4c --- /dev/null +++ b/LICENSE.md @@ -0,0 +1,46 @@ +License +======= + +Unless otherwise noted, This project is in the public domain in the United +States because it contains materials that originally came from the United +States Geological Survey, an agency of the United States Department of +Interior. For more information, see the official USGS copyright policy at +https://www.usgs.gov/information-policies-and-instructions/copyrights-and-credits + +Additionally, we waive copyright and related rights in the work +worldwide through the CC0 1.0 Universal public domain dedication. + + +CC0 1.0 Universal Summary +------------------------- + +This is a human-readable summary of the +[Legal Code (read the full text)][1]. + + +### No Copyright + +The person who associated a work with this deed has dedicated the work to +the public domain by waiving all of his or her rights to the work worldwide +under copyright law, including all related and neighboring rights, to the +extent allowed by law. + +You can copy, modify, distribute and perform the work, even for commercial +purposes, all without asking permission. + + +### Other Information + +In no way are the patent or trademark rights of any person affected by CC0, +nor are the rights that other persons may have in the work or in how the +work is used, such as publicity or privacy rights. + +Unless expressly stated otherwise, the person who associated a work with +this deed makes no warranties about the work, and disclaims liability for +all uses of the work, to the fullest extent permitted by applicable law. +When using or citing the work, you should not imply endorsement by the +author or the affirmer. + + + +[1]: https://creativecommons.org/publicdomain/zero/1.0/legalcode diff --git a/README.html b/README.html new file mode 100644 index 0000000000000000000000000000000000000000..5a2b6b08e9ec9e3206dc9f5cc137143640bfb477 --- /dev/null +++ b/README.html @@ -0,0 +1,243 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
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Online supporting information for “Statistical power of dynamic occupancy models to identify temporal change: informing the North American Bat Monitoring Program”

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Katharine M. Banner, Kathryn M. Irvine, Thomas J. Rodhouse, Deahn Donner, and Andrea R. Litt

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Citation:

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Banner, K.M., Irvine, K.M., Rodhouse, T.J., Donner, D., and Litt, A.R., 2019, Online supporting information for “Statistical power of dynamic occupancy models to identify temporal change: informing the North American Bat Monitoring Program”, U.S. Geological Survey software release, https://doi.org/10.5066/P9WHOH6D.

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Oveview:

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  • DynOccuPow is the R package.
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  • DynOccuPowREADME.docx provides installation instructions.
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  • models contains the JAGS models required for using the dynamic occupancy model simulation functions in DynOccuPow.
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  • SupportingS1.R is an executable R script to accompany the package and SupportingS2.R

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This code release is related to USGS IPDS # IP-097746

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+ + + + + + + + diff --git a/README.md b/README.md index 593f08160327a4498e0131ccccf96ae582121d82..766ea14d15b5fe50b83898c31b3b247aff72e517 100644 --- a/README.md +++ b/README.md @@ -18,14 +18,7 @@ Banner, K.M., Irvine, K.M., Rodhouse, T.J., Donner, D., and Litt, A.R., 2019, On - [models](models) contains the JAGS models required for using the dynamic occupancy model simulation functions in _DynOccuPow_. - [SupportingS1.R](SupportingS1.R) is an executable R script to accompany the package and SupportingS2.R - - Follow the instructions in _DynOccuPowREADME.docx_ or on the USGS Bitbucket repository [https://doi.org/10.5066/P9WHOH6D](https://doi.org/10.5066/P9WHOH6D) to install the package. + - Follow the instructions in _DynOccuPowREADME.docx_ or on the USGS git repository [https://doi.org/10.5066/P9WHOH6D](https://doi.org/10.5066/P9WHOH6D) to install the package. - -### Disclaimer: - -This software is in the public domain because it contains materials that originally came from the U.S. Geological Survey, an agency of the United States Department of Interior. For more information, see the official USGS copyright policy. - -This software has been approved for release by the U.S. Geological Survey (USGS). Although the software has been subjected to rigorous review, the USGS reserves the right to update the software as needed pursuant to further analysis and review. No warranty, expressed or implied, is made by the USGS or the U.S. Government as to the functionality of the software and related material nor shall the fact of release constitute any such warranty. Furthermore, the software is released on condition that neither the USGS nor the U.S. Government shall be held liable for any damages resulting from its authorized or unauthorized use. - -This software is provided "AS IS". +This code release is related to USGS IPDS # IP-097746 diff --git a/code.json b/code.json new file mode 100644 index 0000000000000000000000000000000000000000..8fbccb9c1124585ed8c42038dcc5f003db089156 --- /dev/null +++ b/code.json @@ -0,0 +1,44 @@ +[ + { + "name": "ip-097746", + "organization": "U.S. Geological Survey", + "description": "Online supporting information for Statistical power of dynamic occupancy models to identify temporal change: informing the North American Bat Monitoring Program", + "version": "0.0.1", + "status": "Production", + + "permissions": { + "usageType": "openSource", + "licenses": [ + { + "name": "Public Domain, CC0-1.0", + "URL": "https://code.usgs.gov/usgs/norock/irvine_k/ip-097746/LICENSE.md" + } + ] + }, + + "homepageURL": "https://code.usgs.gov/usgs/norock/irvine_k/ip-097746", + "downloadURL": "https://code.usgs.gov/usgs/norock/irvine_k/ip-097746-master.zip", + "disclaimerURL": "https://code.usgs.gov/usgs/norock/irvine_k/ip-097746/master/DISCLAIMER.md", + "repositoryURL": "https://code.usgs.gov/usgs/norock/irvine_k/ip-097746.git", + "vcs": "git", + + "laborHours": 500, + + "tags": [ + "dynamic occupancy model","survey design","power analysis" ], + + "languages": [ + "R", + "JAGS" + ], + + "contact": { + "name": "Kathryn M. Irvine", + "email": "kirvine@usgs.gov" + }, + + "date": { + "metadataLastUpdated": "2019-12-02" + } + } +]