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# USGS Public Project Explorer

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 **[ABAM_project / ABAM_package](https://code.usgs.gov/abam/abam_package)**
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_Updated: 2021-12-06T20:11:48.708Z_
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R package ABAM facilitates the workflow for the Annual Brome Adaptive Management (ABAM) decision support tool. The ABAM program is a partnership between the National Park Service and USGS.
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 **[ARC / deep-learning-with-telemetry-data](https://code.usgs.gov/arc/deep-learning-with-telemetry-data)**
_Updated: 2019-11-13T21:58:18.625Z_
 
Repo for unsupervised clustering of golden eagle telemetry data with deep learning code
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 **[ARC / rasterized-building-footprints](https://code.usgs.gov/arc/rasterized-building-footprints)**
_Updated: 2020-06-23T18:02:08.528Z_
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 **[ASL / Papers / Ringler / GSN Timing](https://code.usgs.gov/asl/papers/ringler/gsn-timing)**
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_Updated: 2021-05-12T23:18:29.302Z_
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 **[ASL / Papers / Ringler / Rayleigh attenuation study](https://code.usgs.gov/asl/papers/ringler/rayleigh-attenuation-study)**
_Updated: 2021-03-11T19:17:16.185Z_
 
Code for Rayleigh wave inversion.
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 **[ASL / Papers / dwilson / seismic-network-detection-modeling](https://code.usgs.gov/asl/papers/dwilson/seismic-network-detection-modeling)**
_Updated: 2021-05-25T15:40:31.326Z_
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 **[ASL / asl-java-utils](https://code.usgs.gov/asl/asl-java-utils)**
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_Updated: 2021-11-30T22:55:37.239Z_
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Java code to handle common, shared processing tasks like SEED file loading and power spectra calculation
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 **[Alaska Science Center / Arctic_Shorebird_Population_Model](https://code.usgs.gov/asc/arctic_shorebird_population_model)**
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_Updated: 2021-01-14T22:46:14.067Z_
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 **[Alaska Science Center / Bioinformatics / USGS_ASC_Python_and_Biopython_scripts](https://code.usgs.gov/asc/Bioinformatics/USGS_ASC_Python_and_Biopython_scripts)**
_Updated: 2020-03-04T18:32:43.372Z_
 
U.S. Geological Survey, Alaska Science Center, bioinformatic scripts written in Python and Biopython used to facilitate primer design, database development, and Next Generation Sequencing data processing
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 **[Alaska Science Center / Icemail](https://code.usgs.gov/asc/icemail)**
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_Updated: 2021-04-29T22:59:46.917Z_
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Scripting to support logistics and navigational planning in Alaskan ice bearing waters. Provides information in a manner that is convenient for users aboard offshore vessels and remote communities with limited internet data access.
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 **[Alaska Science Center / Nest_Survival_Bias_Analysis](https://code.usgs.gov/asc/nest_survival_bias_analysis)**
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_Updated: 2021-04-07T01:04:04.838Z_
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Script to simulate data and apply four estimators of nest success to evaluate bias resulting from changes in daily survival rates with age
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 **[BHS Risk Tool Group / BHSRoCTGUI](https://code.usgs.gov/bhs-risk-tool-group/bhsroctgui)**
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_Updated: 2021-09-23T15:38:43.029Z_
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 **[BHS Risk Tool Group / BHSforay](https://code.usgs.gov/bhs-risk-tool-group/bhsforay)**
_Updated: 2021-04-28T23:00:01.670Z_
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 **[BHS Risk Tool Group / BHSkde](https://code.usgs.gov/bhs-risk-tool-group/bhskde)**
_Updated: 2021-04-28T23:09:19.005Z_
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 **[BHS Risk Tool Group / Bighorn Sheep Risk Tool](https://code.usgs.gov/bhs-risk-tool-group/bighorn-sheep-risk-tool)**
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_Updated: 2021-11-05T21:01:16.731Z_
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 **[CCH / DSAS](https://code.usgs.gov/cch/dsas)**
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_Updated: 2021-11-10T13:02:16.124Z_
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Digital Shoreline Analysis System
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 **[California Water Science Center / One Water Hydrologic Flow Model - Legacy / OneWater - Legacy Version](https://code.usgs.gov/cawsc/owhm/onewater)**
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_Updated: 2019-11-08T20:04:11.803Z_
_Tags: Conjunctive Use | Fortran | Integrated Hydrologic Modeling | MF-OWHM | MODFLOW | MODFLOW-OWHM | Numerical Simulation | OneWater_
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Legacy MF-OWHM for

Hanson, R.T. and others, 2018, Rio Grande ... U.S Geological Survey Open-File Report 2018–1091, https://doi.org/10.3133/ofr20181091

Superseded repo is at: 

https://code.usgs.gov/modflow/mf-owhm.git
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 **[California Water Science Center / draper](https://code.usgs.gov/cawsc/draper)**
_Updated: 2019-07-29T16:41:20.693Z_
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 **[Chesapeake Bay Science / Assessments / OverlapZones_kkrause](https://code.usgs.gov/chesapeake-bay-science/assessments/overlapzones_kkrause)**
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_Updated: 2021-03-09T15:40:49.330Z_
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Summarize raster layers within overlapping polygons. This project contains a script and files relating to the summarization of continuous and discrete raster data within overlapping zones.
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 **[Columbia River Research Lab - Quantitative Fisheries Ecology Section / Enhanced_Acoustic_Telemetry_Project](https://code.usgs.gov/crrl_qfes/Enhanced_Acoustic_Telemetry_Project)**
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_Updated: 2021-12-06T18:51:49.732Z_
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Project to house daily simulations from the Delta STARS model.
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 **[Columbia River Research Lab - Quantitative Fisheries Ecology Section / Winter_Run_CJS](https://code.usgs.gov/crrl_qfes/Winter_Run_CJS)**
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_Updated: 2021-11-26T23:15:17.801Z_
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 **[Community for Data Integration / CDI FY16 / evac_dash](https://code.usgs.gov/cdi/cdi-fy16/evac_dash)**
_Updated: 2020-04-10T21:02:55.334Z_
 
Code repository for projects funded by the USGS Community for Data Integration
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 **[Community for Data Integration / CDI FY16 / hazardviz](https://code.usgs.gov/cdi/cdi-fy16/hazardviz)**
_Updated: 2020-04-10T21:18:17.237Z_
 
Code repository for projects funded by the USGS Community for Data Integration
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 **[Community for Data Integration / CDI FY16 / hunting_invasive_species_with_htcondor](https://code.usgs.gov/cdi/cdi-fy16/hunting_invasive_species_with_htcondor)**
_Updated: 2020-04-10T21:19:31.045Z_
 
Code repository for projects funded by the USGS Community for Data Integration
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 **[Community for Data Integration / CDI FY17 / photometadata-webmap-cdi](https://code.usgs.gov/cdi/CDI-FY17/photometadata-webmap-cdi)**
_Updated: 2020-04-10T20:38:31.922Z_
 
Code repository for projects funded by the USGS Community for Data Integration
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 **[Community for Data Integration / CDI FY20 / Jupyter Data Stories](https://code.usgs.gov/cdi/cdi-fy20/jupyter-data-stories)**
_Updated: 2021-01-04T21:18:03.813Z_
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 **[Eastern Ecological Science Center / sars-cov-2-transmission-risk-from-humans-to-bats](https://code.usgs.gov/eastern-ecological-science-center/sars-cov-2-transmission-risk-from-humans-to-bats)**
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_Updated: 2021-10-22T11:21:47.008Z_
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_Tags: COVID-19 | SARS-COV-2 | bats | risk assessment | wildlife disease | zoonotic_
 
Decision-Support Tool to Estimate SARS-CoV-2 Human-to-bat Transmission Risk
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 **[Ecosystems / FRESC / ArcGIS Pro Custom Barcode Creation Tool](https://code.usgs.gov/ecosystems/FRESC/arcgis-pro-custom-barcode-creation-tool)**
_Updated: 2019-02-28T18:51:28.366Z_
 
This tool is being provided free to the public in support of field and laboratory specialists who would like to create custom bar codes in order to better maintain their field and laboratory samples.
This data release contains all of the source code.
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 **[Ecosystems / FRESC / cbinom-dpqr-family-of-functions](https://code.usgs.gov/ecosystems/FRESC/cbinom-dpqr_family-of-functions)**
_Updated: 2019-07-30T17:34:41.041Z_
 
This R package provides a standard d/p/q/r suite of functions for a continuous binomial distribution as presented by: Ilienko, Andreii. 2013. 
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 **[Ecosystems / FRESC / sagebrush_hurdle_model](https://code.usgs.gov/ecosystems/FRESC/sagebrush_hurdle_model)**
_Updated: 2019-06-27T16:12:22.705Z_
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 **[Ecosystems / GenEst](https://code.usgs.gov/ecosystems/GenEst)**
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_Updated: 2021-07-21T19:26:15.255Z_
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 **[FluEgg / fluegg](https://code.usgs.gov/FluEgg/fluegg)**
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_Updated: 2021-07-26T17:23:45.556Z_
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 **[GECSC / Tracking disturbance and inundation to identify wetland loss](https://code.usgs.gov/gecsc/tracking-disturbance-and-inundation-to-identify-wetland-loss)**
_Updated: 2020-06-19T17:14:10.924Z_
 
This project uses Landsat image collections, processed with JavaScript codes in Google Earth Engine, to track annual inundation and disturbance extent. The projects study area extent is the Mid-Atlantic Region, United States.
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 **[GFT / Python GIS Flood Tool](https://code.usgs.gov/gft/python-gis-flood-tool)**
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_Updated: 2021-07-22T19:24:04.452Z_
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 **[GMEGSC / ibluff](https://code.usgs.gov/gmegsc/ibluff)**
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_Updated: 2021-09-07T14:35:21.637Z_
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 **[Great Lakes Science Center / Wetlands / Annual Management Unit Summary Code](https://code.usgs.gov/great-lakes-science-center/wetlands/annual-management-unit-summary-code)**
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_Updated: 2021-01-22T22:14:51.700Z_
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This software summarizes participant data submitted to the Phragmites Adaptive Management Framework into individualized PDF reports that allow participants to track and share their progress in the program.
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 **[Great Lakes Science Center / Wetlands / Data analysis and figures for Differences in Rhizosphere Microbial Communities Between Native and Non-Native Phragmites australis May Depend on Stand Density](https://code.usgs.gov/great-lakes-science-center/wetlands/Phrag-Rhizosphere-Analysis)**
_Updated: 2021-08-12T15:14:43.850Z_
 
This repository hold the code to reproduce the data analyses and figures found in "Differences in Rhizosphere Microbial Communities Between Native and Non-Native Phragmites australis May Depend on Stand Density" published in Ecology and Evolution.
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 **[INL / ObsNetQW](https://code.usgs.gov/inl/obsnetqw)**
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_Updated: 2021-07-19T16:52:08.787Z_
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Assessment of a water-quality aquifer monitoring network
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 **[INL / inldata](https://code.usgs.gov/inl/inldata)**
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_Updated: 2021-09-08T19:22:03.689Z_
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Collection of datasets for the USGS-INL aquifer monitoring networks
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 **[ISO Content Specs / Basic Modules](https://code.usgs.gov/iso-content-specs/basic-modules)**
_Updated: 2020-01-10T02:02:16.490Z_
 
Essential modules for ISO metadata, defining documentation requirements for Basic (all USGS metadata), Geospatial, Lineage, Biological.
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 **[Legleiter, Carl J. / ORByT - Optical River Bathymetry Toolkit](https://code.usgs.gov/cjl/orbyt-optical-river-bathymetry-toolkit)**
_Updated: 2020-06-11T19:15:32.058Z_
 
The Optical River Bathymetry Toolkit, ORByT, is an application to facilitate mapping water depth in river channels from passive optical image data.  ORByT provides an integrated workflow for image processing, depth retrieval, and export of results.
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 **[MAKB / MapKB](https://code.usgs.gov/makb/MapKB)**
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_Updated: 2021-05-14T19:33:37.309Z_
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This is the proof-of-concept for the Map as a Knowledge Base (MapKB). Dalia Varanka and Lynn Usery created the conceptual design and the software implementation was developed by Jacques Bourquin. 
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 **[MAKB / MapKB Assets](https://code.usgs.gov/makb/mapkb-assets)**
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_Updated: 2021-05-13T23:09:04.057Z_
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 **[MAKB / MapKB Docker Container](https://code.usgs.gov/makb/mapkb-docker-container)**
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_Updated: 2021-05-14T17:03:51.032Z_
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Docker container for MapKB
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 **[Mississippi Alluvial Plain / gw / Convert infoGW to GWmaster for visGWDB](https://code.usgs.gov/map/gw/infoGW2visGWDB)**
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_Updated: 2021-11-29T18:15:54.859Z_
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_Tags: Benford's law | groundwater | water level_
 
An R groundwater-data processing utility for manipulating, veracity checking, and converting an 'infoGW' object to the 'GWmaster' object for the visGWDB software with demonstration for the Mississippi River Valley alluvial aquifer.
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 **[Mississippi Alluvial Plain / gw / Groundwater informatics](https://code.usgs.gov/map/gw/visGWDBmrva)**
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_Updated: 2021-03-20T13:33:23.025Z_
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_Tags: generalized additive model | groundwater | hydrograph | statistics | support vector machine | water level_
 
The code collection of visGWDB is a framework for groundwater-level informatics. This visGWDBmrva repository is made to be a static demonstration for the Mississippi River Valley alluvial aquifer (MRVA) and support of other derivative products.
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 **[Mississippi Alluvial Plain / maprandomforest](https://code.usgs.gov/map/maprandomforest)**
_Updated: 2021-06-08T18:06:38.808Z_
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 **[Mississippi Alluvial Plain / wu / aiwum1](https://code.usgs.gov/map/wu/aiwum1)**
_Updated: 2021-03-31T18:47:08.953Z_
 
Aquaculture and Irrigation Water-Use Model (AIWUM) version 1 with demonstration for the Mississippi Alluvial Plain.
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 **[NPWRC-R / hexgrid](https://code.usgs.gov/npwrc-r/hexgrid)**
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_Updated: 2021-07-22T17:16:39.281Z_
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_Tags: Construction and analysis of hexagonal grids_
 
Package `hexgrid` supports the representation, construction, and analysis of polygons in general and hexagonal grids in particular, with an emphasis on applications in wildlife ecology.
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 **[NPWRC-R / mort](https://code.usgs.gov/npwrc-r/mort)**
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_Updated: 2020-10-27T15:00:53.841Z_
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R functions and tutorials: Organizing interval data and estimating cause-specific mortality.
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 **[NWHC software / Software for Space matters - host spatial structure and model plague transmission dynamics and pathways](https://code.usgs.gov/nwhc-software/space-matters)**
_Updated: 2021-01-26T19:51:53.481Z_
 
Russell, R.E., 2020, Data and Software for Space matters: host spatial structure and model plague transmission dynamics and pathways: U.S. Geological Survey software release, https://doi.org/10.5066/P97AJ6LY.
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 **[PCMSC / Marfac Machine Vision Camera Interface](https://code.usgs.gov/pcmsc/marfac-flir-camera-interface)**
_Updated: 2021-09-21T21:03:28.470Z_
_Tags: C# | FLIR | GigE | Machine Vision_
 
This project contains the C# software developed to control and acquire imagery from a FLIR GigE machine vision camera. It is built using the FLIR Spinnaker 64bit SDK version 2.4.0.144 and requires the spinview application and associated dll's.
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 **[PRISM / prism_engine](https://code.usgs.gov/prism/prism_engine)**
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_Updated: 2021-02-06T17:18:09.062Z_
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 **[QRev / QRevPy](https://code.usgs.gov/QRev/QRevPy)**
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_Updated: 2021-12-03T16:40:11.397Z_
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QRev in Python
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 **[RSQ / RSQcomp](https://code.usgs.gov/rsq/rsqcomp)**
_Updated: 2021-11-18T23:28:44.242Z_
 
RSQcomp is an R package that calculates remotely sensed discharge based on the altimdswe relationship. 
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 **[RSQ / altimDSWE](https://code.usgs.gov/rsq/altimdswe)**
_Updated: 2021-11-18T23:23:37.834Z_
 
altimDSWE is an R package that relates altimetry heights to dynamic surface water extent for the purposes of remote sensing large ungaged rivers. 
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 **[SPCMSC / Cliff Feature Delineation Tool and Baseline Builder](https://code.usgs.gov/spcmsc/cliff-feature-delineation-tool-and-baseline-builder)**
_Updated: 2020-08-19T14:30:16.647Z_
 
The Cliff Feature Delineation Tool scans digital elevation models (DEM) to delineate features on seacliffs like the cliff top, midline, toe, and convexities/concavities on the cliff face, outputting linear features as polylines and point shapefiles. 
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 **[SPCMSC / Multi-grid Analysis of Point Stability](https://code.usgs.gov/spcmsc/multi-grid-analysis-of-point-stability)**
_Updated: 2021-05-26T17:44:40.931Z_
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 **[SPCMSC / Seafloor Elevation Change Analysis Tool](https://code.usgs.gov/spcmsc/volume-and-elevation-calculation-software)**
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_Updated: 2021-05-20T21:14:15.318Z_
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Seafloor Elevation Change Analysis Tool (SECAT) is a script that computes both elevation change and volume change between two sets of data covering the same area at different points in time. 
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 **[SPCMSC / Subaerial Barrier Sediment Partitioning Model](https://code.usgs.gov/spcmsc/subaerial-barrier-sediment-partitioning-model)**
_Updated: 2020-10-30T17:59:03.459Z_
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 **[Science Analytics and Synthesis / BioScience / drip / drip-dash-app](https://code.usgs.gov/sas/bioscience/drip/drip-dash-app)**
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_Updated: 2021-10-20T20:40:06.918Z_
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A tool for exploring trends about dam removal science and querying published scientific studies that evaluate environmental response to dam removals.
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 **[Science Analytics and Synthesis / BioScience / drip / pydrip](https://code.usgs.gov/sas/bioscience/drip/pydrip)**
_Updated: 2021-08-04T20:30:47.547Z_
 
This package handles retrieval and preparation of the source data for the Dam Removal Information Portal API. 
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 **[Science Analytics and Synthesis / BioScience / xstrm](https://code.usgs.gov/sas/bioscience/xstrm)**
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_Updated: 2021-06-03T19:42:38.533Z_
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A USGS software package and associated command line tool that captures universal methods for stream network summarization.  
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 **[Science Analytics and Synthesis / Science Data Management / publink](https://code.usgs.gov/sas/sdm/publink)**
_Updated: 2020-08-21T21:11:55.141Z_
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 **[SolVES / SolVES 4.0](https://code.usgs.gov/solves/solves-4.0)**
_Updated: 2020-08-28T15:05:47.243Z_
 
Source code for SolVES 4.0 developed in python as a QGIS plugin.
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 **[Southwest Gravity Program / GSadjust](https://code.usgs.gov/sgp/gsadjust)**
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_Updated: 2021-03-11T00:02:48.944Z_
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GUI for processing gravity-survey data
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 **[Southwest Gravity Program / Gravity Data Spreadsheet](https://code.usgs.gov/sgp/gravity-data-spreadsheet)**
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_Updated: 2021-02-24T14:48:26.913Z_
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Excel Workbooks for collecting relative-gravity data 
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 **[StreamStats / DataPrepTools](https://code.usgs.gov/StreamStats/datapreptools)**
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_Updated: 2021-09-07T15:22:00.202Z_
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Tools for preparing terrain data for inclusion in USGS StreamStats. Documentation: https://usgs.github.io/water-datapreptools/
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 **[StreamStats / FCPGtools](https://code.usgs.gov/StreamStats/FCPGtools)**
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_Updated: 2021-09-27T23:09:47.502Z_
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Tools to create flow-conditioned parameter grids (FCPGs) from flow direction grids and input parameter datasets.  Documentation: https://usgs.github.io/water-fcpg-tools/
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 **[StreamStats / PFFREX](https://code.usgs.gov/StreamStats/pffrex)**
_Updated: 2021-07-12T13:40:25.351Z_
 
Peak Flow Frequency R EXtensions
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 **[UMESC / PESTPP_sensitivity_analysis](https://code.usgs.gov/umesc/pestpp_sensitivity_analysis)**
_Updated: 2020-01-30T21:12:58.599Z_
 
An example of using the PESTPP software for sensitivity analysis on an ecological model. 
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 **[UMESC / fishStan](https://code.usgs.gov/umesc/fishStan)**
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_Updated: 2020-10-16T13:21:39.256Z_
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A collection of fisheries models coded in Stan.
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 **[UMESC / introduction_to_r](https://code.usgs.gov/umesc/introduction_to_r)**
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_Updated: 2020-11-16T14:39:27.245Z_
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Introduction to R tutorial. 
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 **[UMESC / occupancy_correlated_error](https://code.usgs.gov/umesc/occupancy_correlated_error)**
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_Updated: 2020-11-16T14:31:56.155Z_
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This project presents an occupancy model with correlated error structure. 
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 **[UMESC / quant-ecology / Carp Demographic Rates](https://code.usgs.gov/umesc/quant-ecology/carp_demographic_rates)**
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_Updated: 2021-12-06T21:52:21.737Z_
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Fits hierarchical models to carp data.
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 **[UMESC / quant-ecology / climatchR](https://code.usgs.gov/umesc/quant-ecology/climatchr)**
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_Updated: 2021-12-03T16:53:47.306Z_
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An R implementation of Climatch (https://climatch.cp1.agriculture.gov.au/).
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 **[UMESC / quant-ecology / ecotoxicology_hierarhcial_data](https://code.usgs.gov/umesc/quant-ecology/ecotoxicology_hierarhcial_data)**
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_Updated: 2021-11-30T15:22:15.986Z_
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 **[UMESC / quant-ecology / fishStan](https://code.usgs.gov/umesc/quant-ecology/fishstan)**
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_Updated: 2021-10-14T18:15:19.561Z_
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Version 2+ of the fishStan package.
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 **[UMESC / quant-ecology / metaipm](https://code.usgs.gov/umesc/quant-ecology/metaipm)**
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_Updated: 2021-11-30T14:53:10.849Z_
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A Meta-population Integral Projection Model
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 **[UMESC / quant-ecology / occStan](https://code.usgs.gov/umesc/quant-ecology/occstan)**
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_Updated: 2021-11-23T21:40:39.224Z_
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Occupancy modeling with Stan
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 **[USGS Fortran / Batteries Included Fortran Library](https://code.usgs.gov/fortran/bif)**
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_Updated: 2021-05-03T23:02:05.387Z_
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Batteries Included Fortran Library (BiF-lib)

BiF-lib assists in file I/O, common operations present in other languages, and include data types that mimic python data types (list and dict).

[Go to Readme](https://code.usgs.gov/fortran/bif#-)
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 **[USGS MODFLOW / MODFLOW One-Water Hydrologic Flow Model](https://code.usgs.gov/modflow/mf-owhm)**
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_Updated: 2021-06-19T14:00:33.696Z_
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_Tags: Conjunctive Use | Fortran | Integrated Hydrologic Modeling | MF-OWHM | MODFLOW | MODFLOW-OWHM | Numerical Simulation | OWHM | OneWater_
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Official MF-OWHM Software Page for Conjunctive Use and Integrated Hydrologic Flow Modeling
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**View the README.md at the bottom of this page**

for downloads and background info
[(or click here)](https://code.usgs.gov/modflow/mf-owhm#-)
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 **[VSC / Publications / Flinders_A / H2-seafloor-estimator](https://code.usgs.gov/vsc/publications/flinders_a/H2-seafloor-estimator)**
391
_Updated: 2020-09-16T20:17:46.006Z_
392
393
394
_Tags: oceanography | planetary science_
 
Supplemental Materials for;
395
Sauvage, J. F., et al. The contribution of water radiolysis to marine sedimentary life, Nature Communications (submitted) (2020).
396
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398
 ___
 **[VSC / Publications / gTOOLS](https://code.usgs.gov/vsc/publications/gtools)**
_Updated: 2021-04-29T03:07:22.429Z_
399
400
 ___
 **[VSC / Swarm](https://code.usgs.gov/vsc/swarm)**
401
_Updated: 2021-03-25T23:51:47.105Z_
402
403
 
A Java application designed to display and analyze seismic waveforms in real-time. See http://volcanoes.usgs.gov/software/swarm.
404
405
406
407
408
409
410
411
412
413
 ___
 **[VTCFWRU / AMModels](https://code.usgs.gov/vtcfwru/ammodels)**
_Updated: 2019-12-13T22:42:10.316Z_
 
The R package AMModels and supporting documentation. Please read the ReadMe file below to get started.

:point_left:  Look for the Wiki link in the left menu.

 ___
 **[VTCFWRU / AMMonitor](https://code.usgs.gov/vtcfwru/ammonitor)**
414
_Updated: 2021-12-06T15:16:04.171Z_
415
416
417
418
419
420
421
422
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_Tags: The R package AMMonitor._
 
The R package AMMonitor and supporting documentation.  Please read the ReadMe file below to get started.


:point_left:  Look for the Wiki link in the left menu.

 ___
 **[VTCFWRU / AMPop](https://code.usgs.gov/vtcfwru/ampop)**
424
_Updated: 2021-05-06T15:28:04.166Z_
425
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The R package AMPop and supporting documentation.  Please read the ReadMe file below to get started.


:point_left:  Look for the Wiki link in the left menu.

431
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435
 ___
 **[WERC / redwood_field_station / poscrptR](https://code.usgs.gov/werc/redwood_field_station/poscrptr)**
_Updated: 2021-01-28T16:44:49.023Z_
 
R package that exports a shiny app which predicts post-fire conifer regeneration.
436
437
 ___
 **[WIM / WQ_HUC_reports](https://code.usgs.gov/WiM/WQ_HUC_reports)**
438
_Updated: 2021-12-01T15:02:56.198Z_
439
440
441
442
443
444
445
 ___
 **[Water / COGG / Salinity / fruitvale](https://code.usgs.gov/water/cogg/salinity/fruitvale)**
_Updated: 2018-09-27T22:08:51.950Z_
 
Groundwater TDS model for the Fruitvale and Rosedale Ranch oil fields, Kern County, California.
 ___
 **[Water / EDEN](https://code.usgs.gov/water/eden)**
446
_Updated: 2020-12-30T19:10:37.477Z_
447
448
 ___
 **[Water / EGRET](https://code.usgs.gov/water/EGRET)**
449
_Updated: 2021-06-15T18:25:49.498Z_
450
451
452
453
454
_Tags: rstats_
 
An R-package for the analysis of long-term changes in water quality and streamflow, including the water-quality method Weighted Regressions on Time, Discharge, and Season (WRTDS)
 ___
 **[Water / EGRETci](https://code.usgs.gov/water/EGRETci)**
455
_Updated: 2021-06-15T18:26:21.237Z_
456
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A bootstrap method for estimating uncertainty of water quality trends
 ___
 **[Water / ESPD / HGB / 1DTempPro](https://code.usgs.gov/water/espd/hgb/1dtemppro)**
_Updated: 2020-05-21T17:59:47.077Z_
 
USGS 1DTempPro is a computer program for analysis of vertical one-dimensional (1D) temperature profiles
 ___
 **[Water / ESPD / HGB / DTSGUI](https://code.usgs.gov/water/espd/hgb/DTSGUI)**
_Updated: 2019-12-10T14:16:16.532Z_
 ___
 **[Water / ESPD / HGB / FLASH](https://code.usgs.gov/water/espd/hgb/flash)**
_Updated: 2020-05-21T18:02:53.874Z_
 
FLASH: A Computer Program for Flow-Log Analysis of Single Holes
 ___
 **[Water / ESPD / HGB / FLASH-R](https://code.usgs.gov/water/espd/hgb/flash-r)**
_Updated: 2020-04-03T17:32:47.006Z_
 
FLASH-R (Flow-Log Analysis of Single Holes) is an R app for the analysis of borehole vertical flow logs to estimate fracture (or layer) transmissivities and far-field hydraulic heads.
 ___
 **[Water / ESPD / HGB / FRGT](https://code.usgs.gov/water/espd/hgb/frgt)**
_Updated: 2020-05-21T18:01:53.241Z_
 
The Fractured Rock Geophysical Toolbox Method Selection Tool (FRGT-MST) is an Excel-based tool for identification of geophysical methods most likely to be appropriate for project goals and site conditions.
 ___
 **[Water / ESPD / HGB / MoisturEC](https://code.usgs.gov/water/espd/hgb/moisturec)**
_Updated: 2020-05-21T18:03:18.040Z_
 
MoisturEC: R-based GUI to combine electrical conductivity data with point moisture measurements
 ___
 **[Water / ESPD / HGB / SEER](https://code.usgs.gov/water/espd/hgb/seer)**
_Updated: 2020-05-21T18:01:27.521Z_
 
Scenario Evaluator for Electrical Resistivity (SEER) is an Excel-based decision support tool to assess the likely outcome of using 2D electrical resistivity imaging for site characterization and remediation monitoring.
 ___
 **[Water / Elapsed Time  for Casing Storage Elimination](https://code.usgs.gov/water/elapsed-time-for-casing-storage-elimination)**
493
_Updated: 2020-08-04T18:50:27.560Z_
494
495
496
497
498
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500
 
An open source spreadsheet for Estimation of the Ellapsed Time for Casing Storage Effects on Drawdown to be Eliminated for Single-Well Pumping Test Analysis
 ___
 **[Water / Equivalent Fresh Groundwater Head for Potentiometric Maps](https://code.usgs.gov/water/equivalent-fresh-groundwater-head-for-potentiometric-maps)**
_Updated: 2019-04-10T16:05:14.198Z_
 
Open source spreadsheet for general use for calculation of equivalent freshwater altitude at wells where the water quality data indicate the well is tapping brackish <10,000 ppm chloride to use for potentiometric maps.
501
502
503
 ___
 **[Water / Linesink-maker](https://code.usgs.gov/water/Linesink-maker)**
_Updated: 2021-04-06T19:32:31.502Z_
504
505
 ___
 **[Water / PAT](https://code.usgs.gov/water/pat)**
506
_Updated: 2020-11-19T18:19:32.039Z_
507
508
509
_Tags: groundwater sampling | in-well flow | pumping | well chemistry_
 
Purge Analyzer Tool - For computation of in-well time of travel of groundwater under pumping conditions
510
511
 ___
 **[Water / PHREEQ-N-AMDTreat](https://code.usgs.gov/water/phreeq-n-amdtreat)**
512
_Updated: 2021-11-10T21:06:57.840Z_
513
514
 
The executable PHREEQ-N-AMDTreat code uses PHREEQC with a customized user-interface developed with Visual Studio 2019 to simulate water-quality effects resulting from treatment of acid mine drainage. 
515
516
517
518
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520
 ___
 **[Water / PHREEQ-N-Titration-PO4-Adsorption](https://code.usgs.gov/water/phreeq-n-titration-po4-adsorption)**
_Updated: 2021-11-19T22:00:14.130Z_
_Tags: PHREEQC | adsorption | hydrous aluminum oxide | hydrous ferric oxide | hydrous manganese oxide | pH | phosphate | precipitation_
 
Two complementary water-quality modeling tools (CausticTitration_PO4mg.exe, CausticTitration_PO4moles.exe) simulate equilibrium processes that may attenuate dissolved concentrations of phosphate plus associated solutes.
521
522
 ___
 **[Water / PSLoadEsT](https://code.usgs.gov/water/psloadest)**
523
_Updated: 2021-05-12T15:26:30.056Z_
524
525
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527
 
A user-friendly interface for generating reproducible load calculations for point source dischargers while managing common data challenges including duplicates, incompatible input tables, and missing nutrient concentration or effluent flow data.
 ___
 **[Water / RESTORE / Geospatial layers in R](https://code.usgs.gov/water/restore/aregis)**
528
_Updated: 2021-04-02T19:03:55.851Z_
529
530
531
532
533
_Tags: GIS | Gulf Coast Ecosystem Restoration Council | spatial analysis in R_
 
Geospatial layers transformed to R language spatial objects for RESTORE project scripting convenience.
 ___
 **[Water / RESTORE / fdclmrpplo](https://code.usgs.gov/water/restore/fdclmrpplo)**
534
_Updated: 2021-07-15T17:43:09.187Z_
535
536
537
_Tags: HUC12 | L-moments | Lmoments | Tobit | censored data | flow-duration curve | generalized additive model | huc12 | level-12 hydrologic unit code | streamflow_
 
Source code for estimation of L-moments and percent no-flow conditions for decadal flow-duration curves and estimation at level-12 hydrologic unit codes along with other statistical computations
538
539
 ___
 **[Water / RESTORE / scNIDaregis](https://code.usgs.gov/water/restore/scNIDaregis)**
540
_Updated: 2021-07-01T18:06:29.588Z_
541
542
543
_Tags: Arkansas | Colorado | Kansas | Louisiana | Missouri | National Inventory of Dams | New Mexico | Oklahoma | Texas | reservoir storage | water resources_
 
scNIDaregis—Geospatial Processing of Selected Components of the National Inventory of Dams with a State-Level Aggregation Scheme and Post-Processing Features for Basin-Specific Tabulation
544
545
 ___
 **[Water / RESTORE / syntheticdv2lff](https://code.usgs.gov/water/restore/syntheticdv2lff)**
546
_Updated: 2021-11-10T14:18:18.367Z_
547
548
549
_Tags: Pearson Type III | Pearson type III | QppQ | hydrograph | log Pearson Type III | log Pearson type III | low flow | low flow frequency | unit values_
 
RESTORE/syntheticdv2lff—Low-streamflow (low-flow) frequency (LFF) estimation from synthetic daily mean streamflow with bias correction estimated at level-12 hydrologic unit code (HUC12) pour points in the southern and southeastern United States
550
551
552
 ___
 **[Water / SFRmaker](https://code.usgs.gov/water/SFRmaker)**
_Updated: 2021-04-06T19:22:09.449Z_
553
554
555
556
557
558
559
 ___
 **[Water / Sed_SAT](https://code.usgs.gov/water/sed_sat)**
_Updated: 2020-03-09T13:19:36.019Z_
 
Sed_SAT is a user-friendly statistical model that guides the user through the necessary steps in order to quantify the relative contributions of sediment sources in a given watershed. 
 ___
 **[Water / ToxMixtures](https://code.usgs.gov/water/toxmixtures)**
560
_Updated: 2021-11-24T19:30:51.420Z_
561
562
563
564
565
566
567
568
_Tags: rstats_
 
R-package to explore chemical mixtures on toxicity
 ___
 **[Water / Transit-Loss](https://code.usgs.gov/water/Transit-Loss)**
_Updated: 2018-12-19T17:47:09.498Z_
 
Modernization of a FORTRAN77 transit-loss accounting program developed by the USGS to estimate net reusable flows in Fountain and Monument Creeks in El Paso and Pueblo Counties, Colorado to FORTRAN 2003 standard.  
569
570
 ___
 **[Water / WREG](https://code.usgs.gov/water/WREG)**
571
_Updated: 2021-10-01T02:13:14.859Z_
572
573
 ___
 **[Water / WRTPS](https://code.usgs.gov/water/WRTPS)**
574
_Updated: 2021-11-12T22:18:13.893Z_
575
576
 ___
 **[Water / WSC / softwSIR20205086](https://code.usgs.gov/water/wsc/softwSIR20205086)**
577
_Updated: 2021-03-22T15:39:28.419Z_
578
579
580
_Tags: Texas | bankfull | ecological region | ecoregion | hydraulic properties | streamflow_
 
Companion software to USGS SIR 2020–5086.
581
582
583
584
585
586
587
 ___
 **[Water / compHydros](https://code.usgs.gov/water/comphydros)**
_Updated: 2020-03-10T20:11:40.898Z_
 
Composite hydrographs for groundwater principle aquifers.
 ___
 **[Water / dataRetrieval](https://code.usgs.gov/water/dataRetrieval)**
588
_Updated: 2021-12-01T21:24:05.939Z_
589
590
591
592
 
This R package is designed to obtain USGS or EPA water quality sample data, streamflow data, and metadata directly from web services
 ___
 **[Water / facet](https://code.usgs.gov/water/facet)**
593
_Updated: 2021-07-08T20:28:32.596Z_
594
595
596
597
598
599
600
601
 
Floodplain and Channel Evaluation Tool

 ___
 **[Water / intersectr](https://code.usgs.gov/water/intersectr)**
_Updated: 2019-03-05T23:06:24.184Z_
 ___
 **[Water / ncdfgeom](https://code.usgs.gov/water/ncdfgeom)**
602
_Updated: 2021-04-23T12:02:54.856Z_
603
604
605
606
 
https://usgs-r.github.io/ncdfgeom/
 ___
 **[Water / nhdplusTools](https://code.usgs.gov/water/nhdplusTools)**
607
_Updated: 2021-06-23T14:24:24.782Z_
608
609
610
611
 
For the latest development activities or to make contributions, please see: https://github.com/usgs-r/nhdplusTools
 ___
 **[Water / nwm_subset](https://code.usgs.gov/water/nwm_subset)**
612
_Updated: 2021-08-31T20:33:49.665Z_
613
614
 
Some scripts to subset NWM streamflow files. Primary contributions to: https://code.usgs.gov/water/nwm_subset
615
616
 ___
 **[Water / sbtools](https://code.usgs.gov/water/sbtools)**
617
_Updated: 2021-06-07T16:25:59.685Z_
618
619
 ___
 **[Water / stats / HASP](https://code.usgs.gov/water/stats/hasp)**
620
_Updated: 2021-09-14T20:10:06.563Z_
621
622
623
624
 
Hydrologic AnalySis Package
 ___
 **[Water / stats / Multiple Grubbs-Beck Test](https://code.usgs.gov/water/stats/MGBT)**
625
_Updated: 2021-09-15T18:06:03.631Z_
626
627
628
629
630
_Tags: Bulletin 17C | EMA | discharge qualification codes | flood frequency | low outliers | peak streamflow_
 
Compute the multiple Grubbs-Beck low-outlier test on positively distributed data and a few useful utilities for non-interpretive U.S. Geological Survey annual peak-streamflow data processing.
 ___
 **[Water / stats / RSPARROW](https://code.usgs.gov/water/stats/rsparrow)**
631
_Updated: 2021-06-15T16:01:53.662Z_
632
633
 ___
 **[Water / toxEval](https://code.usgs.gov/water/toxEval)**
634
_Updated: 2021-11-19T18:48:55.377Z_
635
636
637
_Tags: rstats_
 
Initial code for studying ToxCast data in relation to measured concentrations.
638
639
 ___
 **[Water / trajPipeFlow](https://code.usgs.gov/water/trajPipeFlow)**
640
_Updated: 2021-07-05T14:56:17.743Z_
641
642
643
_Tags: horizontal discharging pipe | trajectory flow method | vertical discharging pipe | weir_
 
Functions to compute discharge from the trajectory of horizontal and vertical flowing pipes using U.S. Bureau of Reclamation methods.
644
645
 ___
 **[Water / utc2nwislocal](https://code.usgs.gov/water/utc2nwislocal)**
646
_Updated: 2021-08-01T23:59:38.520Z_
647
648
649
_Tags: Coordinated Universal Time | NWIS | National Water Information System | UTC | time zone_
 
A light-weight, dependency-free R package to compute UTC offsets from U.S. Geological Survey National Water Information System (NWIS) time-zone codes. NWIS time-zone codes are not recognized in base R that uses the Olson Names scheme.
650
651
 ___
 **[Water Mission Area / Internet of Water / waterdataui](https://code.usgs.gov/wma/iow/waterdataui)**
652
_Updated: 2021-12-06T20:43:00.316Z_
653
654
 
Water Data For the Nation Site Pages
655
656
 ___
 **[Water Mission Area / Internet of Water / wdfn-viz](https://code.usgs.gov/wma/iow/wdfn-viz)**
657
_Updated: 2021-12-04T09:14:34.225Z_
658
659
 
Node installable package to provide visual identification for Water Data for the Nation pages
660
661
 ___
 **[Water Mission Area / nhgf / GFv2.0](https://code.usgs.gov/wma/nhgf/gfv2.0)**
662
_Updated: 2021-11-30T20:57:45.271Z_
663
664
 
Workflow and code for development of Geospatial Fabric version 2.0
665
666
 ___
 **[Water Mission Area / nhgf / PyGDP](https://code.usgs.gov/wma/nhgf/pyGDP)**
667
_Updated: 2021-11-29T20:53:14.907Z_
668
669
 ___
 **[Water Mission Area / nhgf / ToolsTeam / nldi-xstool](https://code.usgs.gov/wma/nhgf/toolsteam/nldi-xstool)**
670
_Updated: 2021-12-05T15:52:35.870Z_
671
672
 ___
 **[Water Mission Area / nhgf / mainstems](https://code.usgs.gov/wma/nhgf/mainstems)**
673
_Updated: 2021-11-16T21:36:14.573Z_
674
675
 ___
 **[Water Mission Area / nhgf / pygeoapi](https://code.usgs.gov/wma/nhgf/pygeoapi)**
676
_Updated: 2021-12-06T22:42:36.476Z_
677
678
 ___
 **[Water Mission Area / nhgf / pygeoapi-plugin-cookiecutter](https://code.usgs.gov/wma/nhgf/pygeoapi-plugin-cookiecutter)**
679
_Updated: 2021-12-05T16:18:08.047Z_
680
681
 
Cookiecutter project for creating new pygeoapi-plugins.
682
683
 ___
 **[WaveLab / WaveLab](https://code.usgs.gov/wavelab/wavelab)**
684
_Updated: 2021-10-04T20:54:38.872Z_
685
686
687
688
689
 ___
 **[Wetland and Aquatic Research Center / eDNAOccupancy](https://code.usgs.gov/wetland-and-aquatic-research-center/ednaoccupancy)**
_Updated: 2020-06-23T17:21:41.233Z_
 ___
 **[Wildlife Telemetry Toolkit / telemetry code and collaborations](https://code.usgs.gov/wildlife-telemetry-toolkit/telemetry-code-and-collaborations)**
690
_Updated: 2020-08-26T19:24:56.618Z_
691
692
693
694
 
Provisional code for use by project collaborators and to further development.
 ___
 **[cmgp / bi-transect-extractor](https://code.usgs.gov/cmgp/bi-transect-extractor)**
695
_Updated: 2021-10-13T21:26:32.336Z_
696
697
 ___
 **[cmgp / squid5-software](https://code.usgs.gov/cmgp/squid5-software)**
698
_Updated: 2021-10-13T22:05:59.013Z_
699
700
 ___
 **[coawstmodel / COAWST](https://code.usgs.gov/coawstmodel/COAWST)**
701
_Updated: 2021-05-10T19:41:18.833Z_
702
703
704
705
706
 
Coupled-Ocean-Atmosphere-Wave Sediment Transport Modeling System src code
 ___
 **[espa / bulk-downloader](https://code.usgs.gov/espa/bulk-downloader)**
_Updated: 2020-05-15T14:23:36.725Z_
707
708
709
 ___
 **[espa / espa-notebooks](https://code.usgs.gov/espa/espa-notebooks)**
_Updated: 2021-06-02T14:43:14.992Z_
710
711
 ___
 **[espa / landsat-qa-arcgis-toolbox](https://code.usgs.gov/espa/landsat-qa-arcgis-toolbox)**
712
_Updated: 2021-04-28T19:46:51.997Z_
713
714
 
The Landsat QA ArcGIS Toolbox contains functionality to classify and/or extract bit-packed values from QA bands, which enhance the applications of interpretation, mapping, and applying QA values to Landsat data products.
715
716
717
718
719
 ___
 **[fort / NABat / nabatr](https://code.usgs.gov/fort/nabat/nabatr)**
_Updated: 2021-05-17T14:54:32.156Z_
 
R software package used to pull, reformat, and push data from/to the North American Bat Monitoring Database.  NABatR uses a GQL API authentication layer setup to interact with the NABat Database.
720
721
722
723
724
 ___
 **[fort / ecosystems-grit](https://code.usgs.gov/fort/ecosystems-grit)**
_Updated: 2018-09-11T21:46:58.694Z_
 
Geospatial Route Interface Tool
725
726
727
728
729
 ___
 **[fort / ecosystems-grsg_lekdb](https://code.usgs.gov/fort/ecosystems-grsg_lekdb)**
_Updated: 2021-06-01T22:16:53.303Z_
 
Greater sage-grouse national lek database: grsg_lekdb
730
731
732
733
734
735
736
737
738
739
 ___
 **[fort / ecosystems-popcluster](https://code.usgs.gov/fort/ecosystems-popcluster)**
_Updated: 2019-09-04T13:14:07.281Z_
 
Hierarchically nested groupings of similar habitats associated with field surveys while considering biological structure/connectedness (movements between habitats) to be used with analyzing population demographic data.
 ___
 **[fort / whas](https://code.usgs.gov/fort/whas)**
_Updated: 2020-01-14T20:34:49.587Z_
 
wild horse aerial survey
740
741
 ___
 **[ghsc / Earthquake Geology Project / Slip Time Earthquake Path Simulations / STEPS-SAF-TJH](https://code.usgs.gov/ghsc/eqgeo/STEPS/steps-saf-tjh)**
742
_Updated: 2021-11-29T14:28:50.981Z_
743
 
744
These codes simulate potential earthquakes between observation points of dated offset features (field measurements) (Hatem et al, 2021; G-Cubed). The main output is an uncertainty distribution of geologic slip rate based on simulated events. 
745
746
747
748
749
 ___
 **[ghsc / Engineering Seismology and Impacts / Groundfailure / gfail_lifelines](https://code.usgs.gov/ghsc/esi/groundfailure/gfail_lifelines)**
_Updated: 2021-05-18T16:53:24.263Z_
 
Codes for estimating impacts to infrastructure from earthquake-triggered ground failure in near-real-time using the USGS ground failure product probability maps. Currently only one module. gfroads estimates the road blockage probability.
750
751
 ___
 **[ghsc / Engineering Seismology and Impacts / dyfi](https://code.usgs.gov/ghsc/esi/dyfi)**
752
_Updated: 2021-06-14T18:23:43.592Z_
753
754
 
DYFI (PyDYFI) new DYFI version 4 implemented in Python
755
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759
 ___
 **[ghsc / Engineering Seismology and Impacts / shakemap-sampling-tool](https://code.usgs.gov/ghsc/esi/shakemap-sampling-tool)**
_Updated: 2021-04-30T19:32:11.068Z_
 
Sample the online ShakeMap at input coordinates.
760
761
762
763
764
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766
 ___
 **[ghsc / Engineering and Risk Project / design-batch-processor](https://code.usgs.gov/ghsc/erp/design-batch-processor)**
_Updated: 2019-08-19T00:10:05.781Z_
 
Desktop application for making batch requests to the earthquake-design-ws web services.
 ___
 **[ghsc / Hazards Development Team / earthquake-design-ws](https://code.usgs.gov/ghsc/hazdev/earthquake-design-ws)**
767
_Updated: 2021-11-01T22:12:34.111Z_
768
769
 
Web service provided by the U.S. Geological Survey for computing seismic design parameters compatible with various building code reference documents.
770
771
 ___
 **[ghsc / Hazards Development Team / earthquake-event-ws](https://code.usgs.gov/ghsc/hazdev/earthquake-event-ws)**
772
_Updated: 2021-11-03T20:51:29.937Z_
773
774
 
Web service and data feeds for seismic event data
775
776
 ___
 **[ghsc / Hazards Development Team / earthquake-eventadmin](https://code.usgs.gov/ghsc/hazdev/earthquake-eventadmin)**
777
_Updated: 2020-11-30T21:29:12.631Z_
778
779
 ___
 **[ghsc / Hazards Development Team / earthquake-geoserve-ui](https://code.usgs.gov/ghsc/hazdev/earthquake-geoserve-ui)**
780
_Updated: 2021-10-19T15:15:21.640Z_
781
782
 ___
 **[ghsc / Hazards Development Team / earthquake-hazard-tool](https://code.usgs.gov/ghsc/hazdev/earthquake-hazard-tool)**
783
_Updated: 2021-01-22T20:11:05.034Z_
784
785
 ___
 **[ghsc / Hazards Development Team / earthquake-latest-earthquakes](https://code.usgs.gov/ghsc/hazdev/earthquake-latest-earthquakes)**
786
_Updated: 2021-11-19T17:59:07.422Z_
787
788
 
Interactive map and list web application
789
790
 ___
 **[ghsc / Hazards Development Team / earthquake-network-operations](https://code.usgs.gov/ghsc/hazdev/earthquake-network-operations)**
791
_Updated: 2020-12-01T21:12:04.236Z_
792
793
 
Seismic network operations monitoring pages.
794
795
 ___
 **[ghsc / Hazards Development Team / earthquake-rtgm-calculator](https://code.usgs.gov/ghsc/hazdev/earthquake-rtgm-calculator)**
796
_Updated: 2021-07-15T19:33:42.266Z_
797
798
 
Web application for calculating risk targeted ground motions and risk coefficients from hazard curves.
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 ___
 **[ghsc / Hazards Development Team / earthquake-website](https://code.usgs.gov/ghsc/hazdev/earthquake-website)**
801
_Updated: 2021-12-03T22:19:23.980Z_
802
803
 ___
 **[ghsc / Hazards Development Team / hazdev-basemap](https://code.usgs.gov/ghsc/hazdev/hazdev-basemap)**
804
_Updated: 2020-10-15T18:47:11.343Z_
805
806
 
Tile overlays used in hazdev applications.
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808
 ___
 **[ghsc / Hazards Development Team / hazdev-geoserve-ws](https://code.usgs.gov/ghsc/hazdev/hazdev-geoserve-ws)**
809
_Updated: 2021-03-02T17:30:26.106Z_
810
811
 
Geoserve
812
813
 ___
 **[ghsc / Hazards Development Team / hazdev-template](https://code.usgs.gov/ghsc/hazdev/hazdev-template)**
814
_Updated: 2021-11-01T19:41:31.992Z_
815
816
 
Lightweight php template framework
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 **[ghsc / Hazards Development Team / legacy-latest-earthquakes](https://code.usgs.gov/ghsc/hazdev/legacy-latest-earthquakes)**
819
_Updated: 2020-11-16T18:26:50.949Z_
820
821
 
Mobile friendly, interactive earthquake map and list application.
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826
 ___
 **[ghsc / Landslide Hazards Program / DF_Growth](https://code.usgs.gov/ghsc/lhp/df_growth)**
_Updated: 2020-08-04T20:26:31.212Z_
 
Uses empirical debris-growth functions to forecast debris-flow inundation.
827
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 **[ghsc / Landslide Hazards Program / HydroMet](https://code.usgs.gov/ghsc/lhp/hydromet)**
829
_Updated: 2021-05-19T18:30:35.303Z_
830
831
 
Repository for the program HydroMet, developed by Jacob Conrad under the supervision of Ben Mirus and Rex Baum. 
832
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 ___
 **[ghsc / Landslide Hazards Program / Landslide thresholds](https://code.usgs.gov/ghsc/lhp/landslide-thresholds)**
_Updated: 2019-11-13T23:24:28.933Z_
 
Track precipitation and hydrological thresholds for landslide occurrence
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 **[ghsc / Landslide Hazards Program / kw-flow-model](https://code.usgs.gov/ghsc/lhp/kw-flow-model)**
839
_Updated: 2021-06-10T18:48:56.044Z_
840
841
 
Simulate overland flow primarily in burned areas
842
843
 ___
 **[ghsc / Landslide Hazards Program / landslides-website](https://code.usgs.gov/ghsc/lhp/landslides-website)**
844
_Updated: 2021-11-19T22:30:01.283Z_
845
846
 ___
 **[ghsc / Landslide Hazards Program / lsforce](https://code.usgs.gov/ghsc/lhp/lsforce)**
847
_Updated: 2021-11-22T21:59:54.086Z_
848
849
 
A Python-based single-force seismic inversion framework for massive landslides
850
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854
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 **[ghsc / Landslide Hazards Program / soil_depth](https://code.usgs.gov/ghsc/lhp/soil_depth)**
_Updated: 2021-12-03T22:47:19.419Z_
 
A computer program designed for estimating soil thickness over a digital landscape using various empirical and process-based models
855
856
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 **[ghsc / National Earthquake Information Center / Algorithms / neic-traveltime](https://code.usgs.gov/ghsc/neic/algorithms/neic-traveltime)**
857
_Updated: 2021-10-21T15:04:41.978Z_
858
859
 
Port of the NEIC 'TTimes' libraries from FORTRAN77 to Java
860
861
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 **[ghsc / National Earthquake Information Center / Utilities / catalog-qc](https://code.usgs.gov/ghsc/neic/utilities/catalog-qc)**
862
_Updated: 2020-08-27T22:13:49.633Z_
863
864
865
866
 
Tools for catalog quality check
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 **[ghsc / National Earthquake Information Center / neic-machine-learning](https://code.usgs.gov/ghsc/neic/neic-machine-learning)**
867
_Updated: 2021-02-26T17:20:22.467Z_
868
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 ___
 **[ghsc / National Earthquake Information Center / neic-synthetic-depth-phase-modeling](https://code.usgs.gov/ghsc/neic/syndepth)**
870
_Updated: 2021-11-24T20:27:02.414Z_
871
872
873
_Tags: Source Characteriztion_
 
Python tool for Green's function-based  SYNthetic based DEPTH phase modeling (SynDepth). 
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 **[ghsc / National Earthquake Information Center / slab2cloud](https://code.usgs.gov/ghsc/neic/slab2cloud)**
876
_Updated: 2021-09-10T18:01:29.575Z_
877
878
879
880
881
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883
 ___
 **[ghsc / National Geomagnetism Program / Electromagnetic Transfer Functions / EMTF FCU](https://code.usgs.gov/ghsc/geomag/emtf/fcu)**
_Updated: 2020-07-13T21:24:01.544Z_
 
Electromagnetic Transfer Functions File Conversion Utilities (EMTF FCU), (C) 2007-2018 Anna Kelbert, is a set of Fortran 90 routines for electromagnetic transfer function file conversion and rotation.
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 **[ghsc / National Geomagnetism Program / geomag-algorithms](https://code.usgs.gov/ghsc/geomag/geomag-algorithms)**
884
_Updated: 2021-11-30T18:42:07.173Z_
885
886
 
Library for processing Geomagnetic timeseries data.
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888
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 **[ghsc / National Geomagnetism Program / geomag-imp](https://code.usgs.gov/ghsc/geomag/geomag-imp)**
889
_Updated: 2020-11-02T23:36:22.895Z_
890
891
 
Python 3 library for interpolating/imputing geomagnetic field perturbations.
892
893
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 **[ghsc / National Geomagnetism Program / geomag-web-absolutes](https://code.usgs.gov/ghsc/geomag/geomag-web-absolutes)**
894
_Updated: 2020-11-19T20:16:10.305Z_
895
896
 ___
 **[ghsc / National Geomagnetism Program / geomag-website](https://code.usgs.gov/ghsc/geomag/geomag-website)**
897
_Updated: 2020-11-09T21:36:58.688Z_
898
899
 ___
 **[ghsc / National Seismic Hazard Model Project / National Crustal Model / GeoFram](https://code.usgs.gov/ghsc/nshmp/ncm/GeoFram)**
900
_Updated: 2021-07-01T22:11:59.203Z_
901
902
903
904
 
Set of utilities to extract geology profiles and related information from the NCM geologic framework.
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 **[ghsc / National Seismic Hazard Model Project / National Crustal Model / GeoPhys](https://code.usgs.gov/ghsc/nshmp/ncm/GeoPhys)**
905
_Updated: 2021-07-01T22:13:01.977Z_
906
907
908
909
 
Utilities to extract geophysical information from the NCM.
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 **[ghsc / National Seismic Hazard Model Project / National Crustal Model / MinVel](https://code.usgs.gov/ghsc/nshmp/ncm/MinVel)**
910
_Updated: 2021-07-01T22:13:42.621Z_
911
912
913
914
 
Utility to calculate mineral and mineral aggregate moduli and density at specified temperatures and pressures.
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 **[ghsc / National Seismic Hazard Model Project / National Crustal Model / TherMod](https://code.usgs.gov/ghsc/nshmp/ncm/TherMod)**
915
_Updated: 2021-07-01T22:15:43.143Z_
916
917
 
Utilities to extract temperature profiles and related information from the NCM thermal model.
918
919
 ___
 **[ghsc / National Seismic Hazard Model Project / National Crustal Model / ncm-database](https://code.usgs.gov/ghsc/nshmp/ncm/ncm-database)**
920
_Updated: 2021-07-07T17:42:28.450Z_
921
922
923
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925
 ___
 **[ghsc / National Seismic Hazard Model Project / cusvm](https://code.usgs.gov/ghsc/nshmp/cusvm)**
_Updated: 2021-09-03T19:42:28.945Z_
 
Central U.S. Velocity Model
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 **[ghsc / National Seismic Hazard Model Project / nshm-fault-sections](https://code.usgs.gov/ghsc/nshmp/nshm-fault-sections)**
928
_Updated: 2021-11-09T19:55:55.389Z_
929
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931
_Tags: active faults | earthquake source | seismic hazard_
 
Database of geologic fault sections used in National Seismic Hazard Models (NSHMs)
932
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 ___
 **[lcmap / 1_LCMAP_Access](https://code.usgs.gov/lcmap/1_lcmap_access)**
_Updated: 2021-11-01T12:25:43.564Z_
 
Getting Started with LCMAP in Python: Chapter 1 demonstrates how to perform spatiotemporal queries for LCMAP data by submitting requests to the USGS EarthExplorer's (EE) Machine-to-Machine (M2M) API, and how to download and unzip LCMAP tile bundles.
937
938
 ___
 **[lcmap / pyccd](https://code.usgs.gov/lcmap/pyccd)**
939
_Updated: 2021-07-28T13:16:36.095Z_
940
941
942
 ___
 **[lcmap / research / ard-gap-filler](https://code.usgs.gov/lcmap/research/ard-gap-filler)**
_Updated: 2020-06-03T20:41:14.317Z_
943
944
945
 ___
 **[nmic / mapmark4_shiny](https://code.usgs.gov/nmic/mapmark4_shiny)**
_Updated: 2021-04-21T15:14:27.017Z_
946
947
948
949
950
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952
 ___
 **[usgs / DAR_Magnetotelluric](https://code.usgs.gov/usgs/DAR_Magnetotelluric)**
_Updated: 2018-05-14T21:42:48.057Z_
 
Software to Process and Preserve Legacy Magnetotelluric Data
 ___
 **[usgs / MetadataWizard](https://code.usgs.gov/usgs/fort-pymdwizard)**
953
_Updated: 2021-06-30T20:09:26.540Z_
954
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967
_Tags: BDP | CSDGM | Data management | FGDC | XML | metadata_
 
The user manual can be found at: https://usgs.github.io/fort-pymdwizard/

Installers can be downloaded from:  https://github.com/usgs/fort-pymdwizard/releases

Bugs and Improvements can be submitted at: https://github.com/usgs/fort-pymdwizard/issues
 ___
 **[usgs / NOROCK / Cross_P / cwdsims](https://code.usgs.gov/usgs/norock/cross_p/cwdsims)**
_Updated: 2020-05-06T18:54:15.337Z_
_Tags: R | chronic wasting disease | shiny | wildlife disease_
 
An R package to simulate chronic wasting disease dynamics. See the Readme file below for installation instructions. 

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969
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972
 ___
 **[usgs / NOROCK / Graves_T / WildAgg](https://code.usgs.gov/usgs/norock/graves_t/wildagg)**
_Updated: 2021-05-09T13:05:57.408Z_
 
WildAgg is an R package designed to estimate, summarize, and visualize wildlife aggregation metrics using location information like GPS collar data.
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991
992
993
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1000
 ___
 **[usgs / NOROCK / Irvine_K / ip-086589](https://code.usgs.gov/usgs/norock/irvine_k/ip-086589)**
_Updated: 2019-12-10T17:41:17.104Z_
 
Code release for Zero-augmented beta (ZAB) and Zero-augmented beta with observation errors (ZABE) models 
 ___
 **[usgs / NOROCK / Irvine_K / ip-092119](https://code.usgs.gov/usgs/norock/irvine_k/ip-092119)**
_Updated: 2019-12-10T17:36:51.104Z_
 
Code release for fitting occupancy models with design weights
 ___
 **[usgs / NOROCK / Irvine_K / ip-092225](https://code.usgs.gov/usgs/norock/irvine_k/ip-092225)**
_Updated: 2019-12-10T17:29:34.148Z_
 
Code release for simulation based power analysis using false positive occupancy model (Observation Confirmation Model)
 ___
 **[usgs / NOROCK / Irvine_K / ip-097746](https://code.usgs.gov/usgs/norock/irvine_k/ip-097746)**
_Updated: 2019-12-10T17:34:35.720Z_
 
R package to conduct simulation based power analysis with dynamic occupancy models
 ___
 **[usgs / NOROCK / Irvine_K / ip-106111](https://code.usgs.gov/usgs/norock/irvine_k/ip-106111)**
_Updated: 2019-12-10T17:40:24.715Z_
 
Supplement S1: Code Release for fitting OZAB and OZABE to Empirical Datasets in "Cohesive Framework for Modeling Plant Cover Class Data" published in Methods in Ecology and Evolution
 ___
 **[usgs / NOROCK / Irvine_K / ip-108057](https://code.usgs.gov/usgs/norock/irvine_k/ip-108057)**
_Updated: 2019-12-10T17:26:04.550Z_
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