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# USGS Public Project Explorer

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 **[ABAM_project / ABAM_package](https://code.usgs.gov/abam/abam_package)**
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_Updated: 2022-01-25T20:48:51.265Z_
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R package ABAM facilitates the workflow for the Annual Brome Adaptive Management (ABAM) decision support tool. The ABAM program is a partnership between the National Park Service and USGS.
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 **[ARC / deep-learning-with-telemetry-data](https://code.usgs.gov/arc/deep-learning-with-telemetry-data)**
_Updated: 2019-11-13T21:58:18.625Z_
 
Repo for unsupervised clustering of golden eagle telemetry data with deep learning code
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 **[ARC / rasterized-building-footprints](https://code.usgs.gov/arc/rasterized-building-footprints)**
_Updated: 2020-06-23T18:02:08.528Z_
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 **[ASL / Papers / Ringler / GSN Timing](https://code.usgs.gov/asl/papers/ringler/gsn-timing)**
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_Updated: 2021-05-12T23:18:29.302Z_
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 **[ASL / Papers / Ringler / Instrument Gallery Code](https://code.usgs.gov/asl/papers/ringler/instrument-gallery-code)**
_Updated: 2021-12-01T15:16:25.802Z_
 
This is code for the instrument failure gallery.  Ringler, A. T., D. Mason, G. Laske, T. Storm, and M. Templeton (2021).  Why do my squiggles look funny? A gallery of compromised seismic signals, Seismological Research letters.
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 **[ASL / Papers / Ringler / Rayleigh attenuation study](https://code.usgs.gov/asl/papers/ringler/rayleigh-attenuation-study)**
_Updated: 2021-03-11T19:17:16.185Z_
 
Code for Rayleigh wave inversion.
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 **[ASL / Papers / Ringler / Sensor Rodeo](https://code.usgs.gov/asl/papers/ringler/sensor-rodeo)**
_Updated: 2022-01-13T23:42:33.188Z_
 
Code for Local variations in broadband sensor installations: Orientations, sensitivities, and noise levels, Pure Appl. Geophys.
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 **[ASL / Papers / dwilson / seismic-network-detection-modeling](https://code.usgs.gov/asl/papers/dwilson/seismic-network-detection-modeling)**
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_Updated: 2022-01-10T19:27:20.103Z_
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 **[ASL / Papers / reanthony / TA-noise-maps-BSSA](https://code.usgs.gov/asl/papers/reanthony/ta-noise-maps-BSSA)**
_Updated: 2021-12-16T22:49:47.252Z_
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 **[ASL / asl-java-utils](https://code.usgs.gov/asl/asl-java-utils)**
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_Updated: 2022-01-20T19:52:56.266Z_
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Java code to handle common, shared processing tasks like SEED file loading and power spectra calculation
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 **[Alaska Science Center / Arctic_Shorebird_Population_Model](https://code.usgs.gov/asc/arctic_shorebird_population_model)**
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_Updated: 2021-01-14T22:46:14.067Z_
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 **[Alaska Science Center / Bioinformatics / USGS_ASC_Python_and_Biopython_scripts](https://code.usgs.gov/asc/Bioinformatics/USGS_ASC_Python_and_Biopython_scripts)**
_Updated: 2020-03-04T18:32:43.372Z_
 
U.S. Geological Survey, Alaska Science Center, bioinformatic scripts written in Python and Biopython used to facilitate primer design, database development, and Next Generation Sequencing data processing
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 **[Alaska Science Center / Icemail](https://code.usgs.gov/asc/icemail)**
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_Updated: 2021-04-29T22:59:46.917Z_
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Scripting to support logistics and navigational planning in Alaskan ice bearing waters. Provides information in a manner that is convenient for users aboard offshore vessels and remote communities with limited internet data access.
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 **[Alaska Science Center / Nest_Survival_Bias_Analysis](https://code.usgs.gov/asc/nest_survival_bias_analysis)**
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_Updated: 2021-04-07T01:04:04.838Z_
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Script to simulate data and apply four estimators of nest success to evaluate bias resulting from changes in daily survival rates with age
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 **[BHS Risk Tool Group / BHSRoCTGUI](https://code.usgs.gov/bhs-risk-tool-group/bhsroctgui)**
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_Updated: 2021-09-23T15:38:43.029Z_
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 **[BHS Risk Tool Group / BHSforay](https://code.usgs.gov/bhs-risk-tool-group/bhsforay)**
_Updated: 2021-04-28T23:00:01.670Z_
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 **[BHS Risk Tool Group / BHSkde](https://code.usgs.gov/bhs-risk-tool-group/bhskde)**
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_Updated: 2022-01-22T23:21:34.110Z_
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 **[BHS Risk Tool Group / Bighorn Sheep Risk Tool](https://code.usgs.gov/bhs-risk-tool-group/bighorn-sheep-risk-tool)**
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_Updated: 2021-12-31T21:23:55.932Z_
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 **[CCH / DSAS](https://code.usgs.gov/cch/dsas)**
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_Updated: 2021-11-10T13:02:16.124Z_
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Digital Shoreline Analysis System
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 **[California Water Science Center / One Water Hydrologic Flow Model - Legacy / OneWater - Legacy Version](https://code.usgs.gov/cawsc/owhm/onewater)**
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_Updated: 2019-11-08T20:04:11.803Z_
_Tags: Conjunctive Use | Fortran | Integrated Hydrologic Modeling | MF-OWHM | MODFLOW | MODFLOW-OWHM | Numerical Simulation | OneWater_
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Legacy MF-OWHM for

Hanson, R.T. and others, 2018, Rio Grande ... U.S Geological Survey Open-File Report 2018–1091, https://doi.org/10.3133/ofr20181091

Superseded repo is at: 

https://code.usgs.gov/modflow/mf-owhm.git
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 **[California Water Science Center / draper](https://code.usgs.gov/cawsc/draper)**
_Updated: 2019-07-29T16:41:20.693Z_
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 **[Chesapeake Bay Science / Assessments / OverlapZones_kkrause](https://code.usgs.gov/chesapeake-bay-science/assessments/overlapzones_kkrause)**
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_Updated: 2021-03-09T15:40:49.330Z_
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Summarize raster layers within overlapping polygons. This project contains a script and files relating to the summarization of continuous and discrete raster data within overlapping zones.
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 **[Columbia River Research Lab - Quantitative Fisheries Ecology Section / Enhanced_Acoustic_Telemetry_Project](https://code.usgs.gov/crrl_qfes/Enhanced_Acoustic_Telemetry_Project)**
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_Updated: 2022-01-25T19:35:08.234Z_
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Project to house daily simulations from the Delta STARS model.
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 **[Columbia River Research Lab - Quantitative Fisheries Ecology Section / Winter_Run_CJS](https://code.usgs.gov/crrl_qfes/Winter_Run_CJS)**
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_Updated: 2021-11-26T23:15:17.801Z_
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 **[Community for Data Integration / CDI FY16 / evac_dash](https://code.usgs.gov/cdi/cdi-fy16/evac_dash)**
_Updated: 2020-04-10T21:02:55.334Z_
 
Code repository for projects funded by the USGS Community for Data Integration
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 **[Community for Data Integration / CDI FY16 / hazardviz](https://code.usgs.gov/cdi/cdi-fy16/hazardviz)**
_Updated: 2020-04-10T21:18:17.237Z_
 
Code repository for projects funded by the USGS Community for Data Integration
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 **[Community for Data Integration / CDI FY16 / hunting_invasive_species_with_htcondor](https://code.usgs.gov/cdi/cdi-fy16/hunting_invasive_species_with_htcondor)**
_Updated: 2020-04-10T21:19:31.045Z_
 
Code repository for projects funded by the USGS Community for Data Integration
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 **[Community for Data Integration / CDI FY17 / photometadata-webmap-cdi](https://code.usgs.gov/cdi/CDI-FY17/photometadata-webmap-cdi)**
_Updated: 2020-04-10T20:38:31.922Z_
 
Code repository for projects funded by the USGS Community for Data Integration
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 **[Community for Data Integration / CDI FY20 / Jupyter Data Stories](https://code.usgs.gov/cdi/cdi-fy20/jupyter-data-stories)**
_Updated: 2021-01-04T21:18:03.813Z_
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 **[Eastern Ecological Science Center / sars-cov-2-transmission-risk-from-humans-to-bats](https://code.usgs.gov/eastern-ecological-science-center/sars-cov-2-transmission-risk-from-humans-to-bats)**
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_Updated: 2021-10-22T11:21:47.008Z_
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_Tags: COVID-19 | SARS-COV-2 | bats | risk assessment | wildlife disease | zoonotic_
 
Decision-Support Tool to Estimate SARS-CoV-2 Human-to-bat Transmission Risk
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 **[Ecosystems / FRESC / ArcGIS Pro Custom Barcode Creation Tool](https://code.usgs.gov/ecosystems/FRESC/arcgis-pro-custom-barcode-creation-tool)**
_Updated: 2019-02-28T18:51:28.366Z_
 
This tool is being provided free to the public in support of field and laboratory specialists who would like to create custom bar codes in order to better maintain their field and laboratory samples.
This data release contains all of the source code.
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 **[Ecosystems / FRESC / GIS Clipping and Summarization Toolbox](https://code.usgs.gov/ecosystems/FRESC/gis-clipping-and-summarization-toolbox)**
_Updated: 2022-01-11T18:56:19.727Z_
 
This ArcGIS Pro toolbox assists users to efficiently summarize and compile raster information within discrete units (polygons or points) in an area of interest or to create a frequency raster that counts the number of overlapping polygons.
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 **[Ecosystems / FRESC / cbinom-dpqr-family-of-functions](https://code.usgs.gov/ecosystems/FRESC/cbinom-dpqr_family-of-functions)**
_Updated: 2019-07-30T17:34:41.041Z_
 
This R package provides a standard d/p/q/r suite of functions for a continuous binomial distribution as presented by: Ilienko, Andreii. 2013. 
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 **[Ecosystems / FRESC / sagebrush_hurdle_model](https://code.usgs.gov/ecosystems/FRESC/sagebrush_hurdle_model)**
_Updated: 2019-06-27T16:12:22.705Z_
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 **[Ecosystems / GenEst](https://code.usgs.gov/ecosystems/GenEst)**
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_Updated: 2021-07-21T19:26:15.255Z_
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 **[FluEgg / fluegg](https://code.usgs.gov/FluEgg/fluegg)**
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_Updated: 2021-07-26T17:23:45.556Z_
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 **[GECSC / Tracking disturbance and inundation to identify wetland loss](https://code.usgs.gov/gecsc/tracking-disturbance-and-inundation-to-identify-wetland-loss)**
_Updated: 2020-06-19T17:14:10.924Z_
 
This project uses Landsat image collections, processed with JavaScript codes in Google Earth Engine, to track annual inundation and disturbance extent. The projects study area extent is the Mid-Atlantic Region, United States.
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 **[GFT / Python GIS Flood Tool](https://code.usgs.gov/gft/python-gis-flood-tool)**
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_Updated: 2021-07-22T19:24:04.452Z_
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 **[GMEGSC / ibluff](https://code.usgs.gov/gmegsc/ibluff)**
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_Updated: 2021-09-07T14:35:21.637Z_
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 **[Great Lakes Science Center / Wetlands / Annual Management Unit Summary Code](https://code.usgs.gov/great-lakes-science-center/wetlands/annual-management-unit-summary-code)**
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This software summarizes participant data submitted to the Phragmites Adaptive Management Framework into individualized PDF reports that allow participants to track and share their progress in the program.
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 **[Great Lakes Science Center / Wetlands / Data analysis and figures for Differences in Rhizosphere Microbial Communities Between Native and Non-Native Phragmites australis May Depend on Stand Density](https://code.usgs.gov/great-lakes-science-center/wetlands/Phrag-Rhizosphere-Analysis)**
_Updated: 2021-08-12T15:14:43.850Z_
 
This repository hold the code to reproduce the data analyses and figures found in "Differences in Rhizosphere Microbial Communities Between Native and Non-Native Phragmites australis May Depend on Stand Density" published in Ecology and Evolution.
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 **[HyMETT / HyMETT](https://code.usgs.gov/hymett/hymett)**
_Updated: 2022-01-13T19:23:22.939Z_
 
HyMETT R package
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 **[INL / ObsNetQW](https://code.usgs.gov/inl/obsnetqw)**
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Assessment of a water-quality aquifer monitoring network
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 **[INL / inldata](https://code.usgs.gov/inl/inldata)**
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_Updated: 2021-09-08T19:22:03.689Z_
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Collection of datasets for the USGS-INL aquifer monitoring networks
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 **[INL / inlpubs](https://code.usgs.gov/inl/inlpubs)**
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USGS INL Project Office publications: https://usgs-r.github.io/inlpubs/
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 **[ISO Content Specs / Basic Modules](https://code.usgs.gov/iso-content-specs/basic-modules)**
_Updated: 2020-01-10T02:02:16.490Z_
 
Essential modules for ISO metadata, defining documentation requirements for Basic (all USGS metadata), Geospatial, Lineage, Biological.
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 **[Legleiter, Carl J. / ORByT - Optical River Bathymetry Toolkit](https://code.usgs.gov/cjl/orbyt-optical-river-bathymetry-toolkit)**
_Updated: 2020-06-11T19:15:32.058Z_
 
The Optical River Bathymetry Toolkit, ORByT, is an application to facilitate mapping water depth in river channels from passive optical image data.  ORByT provides an integrated workflow for image processing, depth retrieval, and export of results.
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 **[MAKB / MapKB](https://code.usgs.gov/makb/MapKB)**
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This is the proof-of-concept for the Map as a Knowledge Base (MapKB). Dalia Varanka and Lynn Usery created the conceptual design and the software implementation was developed by Jacques Bourquin. 
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 **[MAKB / MapKB Assets](https://code.usgs.gov/makb/mapkb-assets)**
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_Updated: 2021-05-13T23:09:04.057Z_
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 **[MAKB / MapKB Docker Container](https://code.usgs.gov/makb/mapkb-docker-container)**
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Docker container for MapKB
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 **[Mississippi Alluvial Plain / gw / Convert infoGW to GWmaster for visGWDB](https://code.usgs.gov/map/gw/infoGW2visGWDB)**
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_Updated: 2021-11-29T18:15:54.859Z_
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_Tags: Benford's law | groundwater | water level_
 
An R groundwater-data processing utility for manipulating, veracity checking, and converting an 'infoGW' object to the 'GWmaster' object for the visGWDB software with demonstration for the Mississippi River Valley alluvial aquifer.
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 **[Mississippi Alluvial Plain / gw / Groundwater informatics](https://code.usgs.gov/map/gw/visGWDBmrva)**
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_Tags: generalized additive model | groundwater | hydrograph | statistics | support vector machine | water level_
 
The code collection of visGWDB is a framework for groundwater-level informatics. This visGWDBmrva repository is made to be a static demonstration for the Mississippi River Valley alluvial aquifer (MRVA) and support of other derivative products.
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 **[Mississippi Alluvial Plain / maprandomforest](https://code.usgs.gov/map/maprandomforest)**
_Updated: 2021-06-08T18:06:38.808Z_
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 **[Mississippi Alluvial Plain / wu / aiwum1](https://code.usgs.gov/map/wu/aiwum1)**
_Updated: 2021-03-31T18:47:08.953Z_
 
Aquaculture and Irrigation Water-Use Model (AIWUM) version 1 with demonstration for the Mississippi Alluvial Plain.
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 **[NPWRC-R / hexgrid](https://code.usgs.gov/npwrc-r/hexgrid)**
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_Updated: 2021-07-22T17:16:39.281Z_
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_Tags: Construction and analysis of hexagonal grids_
 
Package `hexgrid` supports the representation, construction, and analysis of polygons in general and hexagonal grids in particular, with an emphasis on applications in wildlife ecology.
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 **[NPWRC-R / mort](https://code.usgs.gov/npwrc-r/mort)**
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R functions and tutorials: Organizing interval data and estimating cause-specific mortality.
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 **[NWHC software / Software for Space matters - host spatial structure and model plague transmission dynamics and pathways](https://code.usgs.gov/nwhc-software/space-matters)**
_Updated: 2021-01-26T19:51:53.481Z_
 
Russell, R.E., 2020, Data and Software for Space matters: host spatial structure and model plague transmission dynamics and pathways: U.S. Geological Survey software release, https://doi.org/10.5066/P97AJ6LY.
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 **[PCMSC / Marfac Machine Vision Camera Interface](https://code.usgs.gov/pcmsc/marfac-flir-camera-interface)**
_Updated: 2021-09-21T21:03:28.470Z_
_Tags: C# | FLIR | GigE | Machine Vision_
 
This project contains the C# software developed to control and acquire imagery from a FLIR GigE machine vision camera. It is built using the FLIR Spinnaker 64bit SDK version 2.4.0.144 and requires the spinview application and associated dll's.
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 **[PRISM / prism_engine](https://code.usgs.gov/prism/prism_engine)**
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_Updated: 2021-02-06T17:18:09.062Z_
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 **[QRev / QRevPy](https://code.usgs.gov/QRev/QRevPy)**
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QRev in Python
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 **[RSQ / RSQcomp](https://code.usgs.gov/rsq/rsqcomp)**
_Updated: 2021-11-18T23:28:44.242Z_
 
RSQcomp is an R package that calculates remotely sensed discharge based on the altimdswe relationship. 
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 **[RSQ / altimDSWE](https://code.usgs.gov/rsq/altimdswe)**
_Updated: 2021-11-18T23:23:37.834Z_
 
altimDSWE is an R package that relates altimetry heights to dynamic surface water extent for the purposes of remote sensing large ungaged rivers. 
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 **[SPCMSC / Cliff Feature Delineation Tool and Baseline Builder](https://code.usgs.gov/spcmsc/cliff-feature-delineation-tool-and-baseline-builder)**
_Updated: 2020-08-19T14:30:16.647Z_
 
The Cliff Feature Delineation Tool scans digital elevation models (DEM) to delineate features on seacliffs like the cliff top, midline, toe, and convexities/concavities on the cliff face, outputting linear features as polylines and point shapefiles. 
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 **[SPCMSC / Multi-grid Analysis of Point Stability](https://code.usgs.gov/spcmsc/multi-grid-analysis-of-point-stability)**
_Updated: 2021-05-26T17:44:40.931Z_
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 **[SPCMSC / Seafloor Elevation Change Analysis Tool](https://code.usgs.gov/spcmsc/volume-and-elevation-calculation-software)**
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Seafloor Elevation Change Analysis Tool (SECAT) is a script that computes both elevation change and volume change between two sets of data covering the same area at different points in time. 
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 **[SPCMSC / Subaerial Barrier Sediment Partitioning Model](https://code.usgs.gov/spcmsc/subaerial-barrier-sediment-partitioning-model)**
_Updated: 2020-10-30T17:59:03.459Z_
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 **[Science Analytics and Synthesis / BioScience / drip / drip-dash-app](https://code.usgs.gov/sas/bioscience/drip/drip-dash-app)**
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A tool for exploring trends about dam removal science and querying published scientific studies that evaluate environmental response to dam removals.
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 **[Science Analytics and Synthesis / BioScience / drip / pydrip](https://code.usgs.gov/sas/bioscience/drip/pydrip)**
_Updated: 2021-08-04T20:30:47.547Z_
 
This package handles retrieval and preparation of the source data for the Dam Removal Information Portal API. 
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 **[Science Analytics and Synthesis / BioScience / xstrm](https://code.usgs.gov/sas/bioscience/xstrm)**
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A USGS software package and associated command line tool that captures universal methods for stream network summarization.  
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 **[Science Analytics and Synthesis / Science Data Management / publink](https://code.usgs.gov/sas/sdm/publink)**
_Updated: 2020-08-21T21:11:55.141Z_
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 **[SolVES / SolVES 4.0](https://code.usgs.gov/solves/solves-4.0)**
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Source code for SolVES 4.0 developed in python as a QGIS plugin.
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 **[Southwest Gravity Program / GSadjust](https://code.usgs.gov/sgp/gsadjust)**
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GUI for processing gravity-survey data
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 **[Southwest Gravity Program / Gravity Data Spreadsheet](https://code.usgs.gov/sgp/gravity-data-spreadsheet)**
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Excel Workbooks for collecting relative-gravity data 
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 **[StreamStats / DataPrepTools](https://code.usgs.gov/StreamStats/datapreptools)**
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Tools for preparing terrain data for inclusion in USGS StreamStats. Documentation: https://usgs.github.io/water-datapreptools/
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 **[StreamStats / FCPGtools](https://code.usgs.gov/StreamStats/FCPGtools)**
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_Updated: 2021-09-27T23:09:47.502Z_
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Tools to create flow-conditioned parameter grids (FCPGs) from flow direction grids and input parameter datasets.  Documentation: https://usgs.github.io/water-fcpg-tools/
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 **[StreamStats / PFFREX](https://code.usgs.gov/StreamStats/pffrex)**
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Peak Flow Frequency R EXtensions
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 **[UMESC / PESTPP_sensitivity_analysis](https://code.usgs.gov/umesc/pestpp_sensitivity_analysis)**
_Updated: 2020-01-30T21:12:58.599Z_
 
An example of using the PESTPP software for sensitivity analysis on an ecological model. 
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 **[UMESC / fishStan](https://code.usgs.gov/umesc/fishStan)**
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_Updated: 2020-10-16T13:21:39.256Z_
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A collection of fisheries models coded in Stan.
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 **[UMESC / introduction_to_r](https://code.usgs.gov/umesc/introduction_to_r)**
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_Updated: 2020-11-16T14:39:27.245Z_
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Introduction to R tutorial. 
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 **[UMESC / occupancy_correlated_error](https://code.usgs.gov/umesc/occupancy_correlated_error)**
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_Updated: 2020-11-16T14:31:56.155Z_
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This project presents an occupancy model with correlated error structure. 
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 **[UMESC / quant-ecology / Carp Demographic Rates](https://code.usgs.gov/umesc/quant-ecology/carp_demographic_rates)**
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_Updated: 2021-12-30T18:19:13.285Z_
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Fits hierarchical models to carp data.
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 **[UMESC / quant-ecology / climatchR](https://code.usgs.gov/umesc/quant-ecology/climatchr)**
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_Updated: 2022-01-24T19:07:51.551Z_
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An R implementation of Climatch (https://climatch.cp1.agriculture.gov.au/).
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 **[UMESC / quant-ecology / climatchr_htcondor](https://code.usgs.gov/umesc/quant-ecology/climatchr_htcondor)**
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_Updated: 2022-01-10T15:50:59.755Z_
382
383
 ___
 **[UMESC / quant-ecology / ecotoxicology_hierarhcial_data](https://code.usgs.gov/umesc/quant-ecology/ecotoxicology_hierarhcial_data)**
384
_Updated: 2022-01-13T22:16:10.972Z_
385
386
 ___
 **[UMESC / quant-ecology / fishStan](https://code.usgs.gov/umesc/quant-ecology/fishstan)**
387
_Updated: 2022-01-21T17:52:42.496Z_
388
389
 
Version 2+ of the fishStan package.
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391
 ___
 **[UMESC / quant-ecology / metaipm](https://code.usgs.gov/umesc/quant-ecology/metaipm)**
392
_Updated: 2021-12-29T20:33:42.020Z_
393
394
 
A Meta-population Integral Projection Model
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396
 ___
 **[UMESC / quant-ecology / occStan](https://code.usgs.gov/umesc/quant-ecology/occstan)**
397
_Updated: 2021-12-17T21:30:59.778Z_
398
399
 
Occupancy modeling with Stan
400
401
 ___
 **[USGS Fortran / Batteries Included Fortran Library](https://code.usgs.gov/fortran/bif)**
402
_Updated: 2022-01-24T19:28:29.601Z_
403
404
405
406
407
408
 
Batteries Included Fortran Library (BiF-lib)

BiF-lib assists in file I/O, common operations present in other languages, and include data types that mimic python data types (list and dict).

[Go to Readme](https://code.usgs.gov/fortran/bif#-)
409
410
 ___
 **[USGS MODFLOW / MODFLOW One-Water Hydrologic Flow Model](https://code.usgs.gov/modflow/mf-owhm)**
411
_Updated: 2022-01-24T19:43:53.156Z_
412
_Tags: Conjunctive Use | Fortran | Integrated Hydrologic Modeling | MF-OWHM | MODFLOW | MODFLOW-OWHM | Numerical Simulation | OWHM | OneWater_
413
 
414
MODFLOW OWHM Official Download and Source Repository
415

416
**For download links and background info go to the [README](https://code.usgs.gov/modflow/mf-owhm#-)**
417

418
or scroll down until you see the MF-OWHM banner
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 ___
 **[VSC / Publications / Flinders_A / H2-seafloor-estimator](https://code.usgs.gov/vsc/publications/flinders_a/H2-seafloor-estimator)**
421
_Updated: 2020-09-16T20:17:46.006Z_
422
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_Tags: oceanography | planetary science_
 
Supplemental Materials for;
425
Sauvage, J. F., et al. The contribution of water radiolysis to marine sedimentary life, Nature Communications (submitted) (2020).
426
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428
 ___
 **[VSC / Publications / gTOOLS](https://code.usgs.gov/vsc/publications/gtools)**
_Updated: 2021-04-29T03:07:22.429Z_
429
430
 ___
 **[VSC / Swarm](https://code.usgs.gov/vsc/swarm)**
431
_Updated: 2021-03-25T23:51:47.105Z_
432
433
 
A Java application designed to display and analyze seismic waveforms in real-time. See http://volcanoes.usgs.gov/software/swarm.
434
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436
437
438
439
440
441
442
443
 ___
 **[VTCFWRU / AMModels](https://code.usgs.gov/vtcfwru/ammodels)**
_Updated: 2019-12-13T22:42:10.316Z_
 
The R package AMModels and supporting documentation. Please read the ReadMe file below to get started.

:point_left:  Look for the Wiki link in the left menu.

 ___
 **[VTCFWRU / AMMonitor](https://code.usgs.gov/vtcfwru/ammonitor)**
444
_Updated: 2022-01-22T16:38:41.511Z_
445
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_Tags: The R package AMMonitor._
 
The R package AMMonitor and supporting documentation.  Please read the ReadMe file below to get started.


:point_left:  Look for the Wiki link in the left menu.

 ___
 **[VTCFWRU / AMPop](https://code.usgs.gov/vtcfwru/ampop)**
454
_Updated: 2021-05-06T15:28:04.166Z_
455
456
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The R package AMPop and supporting documentation.  Please read the ReadMe file below to get started.


:point_left:  Look for the Wiki link in the left menu.

461
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463
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465
 ___
 **[WERC / redwood_field_station / poscrptR](https://code.usgs.gov/werc/redwood_field_station/poscrptr)**
_Updated: 2021-01-28T16:44:49.023Z_
 
R package that exports a shiny app which predicts post-fire conifer regeneration.
466
467
 ___
 **[WIM / WQ_HUC_reports](https://code.usgs.gov/WiM/WQ_HUC_reports)**
468
_Updated: 2022-01-11T15:50:18.064Z_
469
470
471
472
473
474
475
 ___
 **[Water / COGG / Salinity / fruitvale](https://code.usgs.gov/water/cogg/salinity/fruitvale)**
_Updated: 2018-09-27T22:08:51.950Z_
 
Groundwater TDS model for the Fruitvale and Rosedale Ranch oil fields, Kern County, California.
 ___
 **[Water / EDEN](https://code.usgs.gov/water/eden)**
476
_Updated: 2020-12-30T19:10:37.477Z_
477
478
 ___
 **[Water / EGRET](https://code.usgs.gov/water/EGRET)**
479
_Updated: 2021-06-15T18:25:49.498Z_
480
481
482
483
484
_Tags: rstats_
 
An R-package for the analysis of long-term changes in water quality and streamflow, including the water-quality method Weighted Regressions on Time, Discharge, and Season (WRTDS)
 ___
 **[Water / EGRETci](https://code.usgs.gov/water/EGRETci)**
485
_Updated: 2021-06-15T18:26:21.237Z_
486
487
488
489
490
491
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494
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A bootstrap method for estimating uncertainty of water quality trends
 ___
 **[Water / ESPD / HGB / 1DTempPro](https://code.usgs.gov/water/espd/hgb/1dtemppro)**
_Updated: 2020-05-21T17:59:47.077Z_
 
USGS 1DTempPro is a computer program for analysis of vertical one-dimensional (1D) temperature profiles
 ___
 **[Water / ESPD / HGB / DTSGUI](https://code.usgs.gov/water/espd/hgb/DTSGUI)**
_Updated: 2019-12-10T14:16:16.532Z_
 ___
 **[Water / ESPD / HGB / FLASH](https://code.usgs.gov/water/espd/hgb/flash)**
_Updated: 2020-05-21T18:02:53.874Z_
 
FLASH: A Computer Program for Flow-Log Analysis of Single Holes
 ___
 **[Water / ESPD / HGB / FLASH-R](https://code.usgs.gov/water/espd/hgb/flash-r)**
_Updated: 2020-04-03T17:32:47.006Z_
 
FLASH-R (Flow-Log Analysis of Single Holes) is an R app for the analysis of borehole vertical flow logs to estimate fracture (or layer) transmissivities and far-field hydraulic heads.
 ___
 **[Water / ESPD / HGB / FRGT](https://code.usgs.gov/water/espd/hgb/frgt)**
_Updated: 2020-05-21T18:01:53.241Z_
 
The Fractured Rock Geophysical Toolbox Method Selection Tool (FRGT-MST) is an Excel-based tool for identification of geophysical methods most likely to be appropriate for project goals and site conditions.
 ___
 **[Water / ESPD / HGB / MoisturEC](https://code.usgs.gov/water/espd/hgb/moisturec)**
_Updated: 2020-05-21T18:03:18.040Z_
 
MoisturEC: R-based GUI to combine electrical conductivity data with point moisture measurements
 ___
 **[Water / ESPD / HGB / SEER](https://code.usgs.gov/water/espd/hgb/seer)**
_Updated: 2020-05-21T18:01:27.521Z_
 
Scenario Evaluator for Electrical Resistivity (SEER) is an Excel-based decision support tool to assess the likely outcome of using 2D electrical resistivity imaging for site characterization and remediation monitoring.
 ___
 **[Water / Elapsed Time  for Casing Storage Elimination](https://code.usgs.gov/water/elapsed-time-for-casing-storage-elimination)**
523
_Updated: 2020-08-04T18:50:27.560Z_
524
525
526
527
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530
 
An open source spreadsheet for Estimation of the Ellapsed Time for Casing Storage Effects on Drawdown to be Eliminated for Single-Well Pumping Test Analysis
 ___
 **[Water / Equivalent Fresh Groundwater Head for Potentiometric Maps](https://code.usgs.gov/water/equivalent-fresh-groundwater-head-for-potentiometric-maps)**
_Updated: 2019-04-10T16:05:14.198Z_
 
Open source spreadsheet for general use for calculation of equivalent freshwater altitude at wells where the water quality data indicate the well is tapping brackish <10,000 ppm chloride to use for potentiometric maps.
531
532
533
 ___
 **[Water / Linesink-maker](https://code.usgs.gov/water/Linesink-maker)**
_Updated: 2021-04-06T19:32:31.502Z_
534
535
 ___
 **[Water / PAT](https://code.usgs.gov/water/pat)**
536
_Updated: 2020-11-19T18:19:32.039Z_
537
538
539
_Tags: groundwater sampling | in-well flow | pumping | well chemistry_
 
Purge Analyzer Tool - For computation of in-well time of travel of groundwater under pumping conditions
540
541
 ___
 **[Water / PHREEQ-N-AMDTreat](https://code.usgs.gov/water/phreeq-n-amdtreat)**
542
_Updated: 2021-11-10T21:06:57.840Z_
543
544
 
The executable PHREEQ-N-AMDTreat code uses PHREEQC with a customized user-interface developed with Visual Studio 2019 to simulate water-quality effects resulting from treatment of acid mine drainage. 
545
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 ___
 **[Water / PHREEQ-N-Titration-PO4-Adsorption](https://code.usgs.gov/water/phreeq-n-titration-po4-adsorption)**
_Updated: 2021-11-19T22:00:14.130Z_
_Tags: PHREEQC | adsorption | hydrous aluminum oxide | hydrous ferric oxide | hydrous manganese oxide | pH | phosphate | precipitation_
 
Two complementary water-quality modeling tools (CausticTitration_PO4mg.exe, CausticTitration_PO4moles.exe) simulate equilibrium processes that may attenuate dissolved concentrations of phosphate plus associated solutes.
551
552
 ___
 **[Water / PSLoadEsT](https://code.usgs.gov/water/psloadest)**
553
_Updated: 2021-05-12T15:26:30.056Z_
554
555
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557
 
A user-friendly interface for generating reproducible load calculations for point source dischargers while managing common data challenges including duplicates, incompatible input tables, and missing nutrient concentration or effluent flow data.
 ___
 **[Water / RESTORE / Geospatial layers in R](https://code.usgs.gov/water/restore/aregis)**
558
_Updated: 2021-04-02T19:03:55.851Z_
559
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_Tags: GIS | Gulf Coast Ecosystem Restoration Council | spatial analysis in R_
 
Geospatial layers transformed to R language spatial objects for RESTORE project scripting convenience.
 ___
 **[Water / RESTORE / fdclmrpplo](https://code.usgs.gov/water/restore/fdclmrpplo)**
564
_Updated: 2021-07-15T17:43:09.187Z_
565
566
567
_Tags: HUC12 | L-moments | Lmoments | Tobit | censored data | flow-duration curve | generalized additive model | huc12 | level-12 hydrologic unit code | streamflow_
 
Source code for estimation of L-moments and percent no-flow conditions for decadal flow-duration curves and estimation at level-12 hydrologic unit codes along with other statistical computations
568
569
 ___
 **[Water / RESTORE / scNIDaregis](https://code.usgs.gov/water/restore/scNIDaregis)**
570
_Updated: 2021-07-01T18:06:29.588Z_
571
572
573
_Tags: Arkansas | Colorado | Kansas | Louisiana | Missouri | National Inventory of Dams | New Mexico | Oklahoma | Texas | reservoir storage | water resources_
 
scNIDaregis—Geospatial Processing of Selected Components of the National Inventory of Dams with a State-Level Aggregation Scheme and Post-Processing Features for Basin-Specific Tabulation
574
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 ___
 **[Water / RESTORE / syntheticdv2lff](https://code.usgs.gov/water/restore/syntheticdv2lff)**
576
_Updated: 2022-01-24T21:15:05.083Z_
577
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579
_Tags: Pearson Type III | Pearson type III | QppQ | hydrograph | log Pearson Type III | log Pearson type III | low flow | low flow frequency | unit values_
 
RESTORE/syntheticdv2lff—Low-streamflow (low-flow) frequency (LFF) estimation from synthetic daily mean streamflow with bias correction estimated at level-12 hydrologic unit code (HUC12) pour points in the southern and southeastern United States
580
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582
 ___
 **[Water / SFRmaker](https://code.usgs.gov/water/SFRmaker)**
_Updated: 2021-04-06T19:22:09.449Z_
583
584
585
586
587
588
589
 ___
 **[Water / Sed_SAT](https://code.usgs.gov/water/sed_sat)**
_Updated: 2020-03-09T13:19:36.019Z_
 
Sed_SAT is a user-friendly statistical model that guides the user through the necessary steps in order to quantify the relative contributions of sediment sources in a given watershed. 
 ___
 **[Water / ToxMixtures](https://code.usgs.gov/water/toxmixtures)**
590
_Updated: 2022-01-19T15:40:06.265Z_
591
592
593
594
595
596
597
598
_Tags: rstats_
 
R-package to explore chemical mixtures on toxicity
 ___
 **[Water / Transit-Loss](https://code.usgs.gov/water/Transit-Loss)**
_Updated: 2018-12-19T17:47:09.498Z_
 
Modernization of a FORTRAN77 transit-loss accounting program developed by the USGS to estimate net reusable flows in Fountain and Monument Creeks in El Paso and Pueblo Counties, Colorado to FORTRAN 2003 standard.  
599
600
 ___
 **[Water / WREG](https://code.usgs.gov/water/WREG)**
601
_Updated: 2021-12-07T21:57:15.061Z_
602
603
 ___
 **[Water / WRTPS](https://code.usgs.gov/water/WRTPS)**
604
_Updated: 2021-12-08T21:31:23.326Z_
605
606
607
608
609
 ___
 **[Water / WSC / bulk_hvsR](https://code.usgs.gov/water/wsc/bulk_hvsR)**
_Updated: 2022-01-13T16:38:36.630Z_
 
bulk_hvsR.r is an R-script to automate processing and plotting passive seismic HVSR (Horizontal to Vertical Spectral Ratio) datasets.
610
611
 ___
 **[Water / WSC / softwSIR20205086](https://code.usgs.gov/water/wsc/softwSIR20205086)**
612
_Updated: 2021-03-22T15:39:28.419Z_
613
614
615
_Tags: Texas | bankfull | ecological region | ecoregion | hydraulic properties | streamflow_
 
Companion software to USGS SIR 2020–5086.
616
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619
620
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622
 ___
 **[Water / compHydros](https://code.usgs.gov/water/comphydros)**
_Updated: 2020-03-10T20:11:40.898Z_
 
Composite hydrographs for groundwater principle aquifers.
 ___
 **[Water / dataRetrieval](https://code.usgs.gov/water/dataRetrieval)**
623
_Updated: 2021-12-20T21:10:31.315Z_
624
625
626
627
 
This R package is designed to obtain USGS or EPA water quality sample data, streamflow data, and metadata directly from web services
 ___
 **[Water / facet](https://code.usgs.gov/water/facet)**
628
_Updated: 2021-07-08T20:28:32.596Z_
629
630
631
632
633
634
635
636
 
Floodplain and Channel Evaluation Tool

 ___
 **[Water / intersectr](https://code.usgs.gov/water/intersectr)**
_Updated: 2019-03-05T23:06:24.184Z_
 ___
 **[Water / ncdfgeom](https://code.usgs.gov/water/ncdfgeom)**
637
_Updated: 2021-04-23T12:02:54.856Z_
638
639
640
641
 
https://usgs-r.github.io/ncdfgeom/
 ___
 **[Water / nhdplusTools](https://code.usgs.gov/water/nhdplusTools)**
642
_Updated: 2021-06-23T14:24:24.782Z_
643
644
645
646
 
For the latest development activities or to make contributions, please see: https://github.com/usgs-r/nhdplusTools
 ___
 **[Water / nwm_subset](https://code.usgs.gov/water/nwm_subset)**
647
_Updated: 2021-08-31T20:33:49.665Z_
648
649
 
Some scripts to subset NWM streamflow files. Primary contributions to: https://code.usgs.gov/water/nwm_subset
650
651
 ___
 **[Water / sbtools](https://code.usgs.gov/water/sbtools)**
652
_Updated: 2021-06-07T16:25:59.685Z_
653
654
 ___
 **[Water / stats / HASP](https://code.usgs.gov/water/stats/hasp)**
655
_Updated: 2021-09-14T20:10:06.563Z_
656
657
658
659
 
Hydrologic AnalySis Package
 ___
 **[Water / stats / Multiple Grubbs-Beck Test](https://code.usgs.gov/water/stats/MGBT)**
660
_Updated: 2021-09-15T18:06:03.631Z_
661
662
663
664
665
_Tags: Bulletin 17C | EMA | discharge qualification codes | flood frequency | low outliers | peak streamflow_
 
Compute the multiple Grubbs-Beck low-outlier test on positively distributed data and a few useful utilities for non-interpretive U.S. Geological Survey annual peak-streamflow data processing.
 ___
 **[Water / stats / RSPARROW](https://code.usgs.gov/water/stats/rsparrow)**
666
_Updated: 2021-06-15T16:01:53.662Z_
667
668
 ___
 **[Water / toxEval](https://code.usgs.gov/water/toxEval)**
669
_Updated: 2021-11-19T18:48:55.377Z_
670
671
672
_Tags: rstats_
 
Initial code for studying ToxCast data in relation to measured concentrations.
673
674
 ___
 **[Water / trajPipeFlow](https://code.usgs.gov/water/trajPipeFlow)**
675
_Updated: 2021-07-05T14:56:17.743Z_
676
677
678
_Tags: horizontal discharging pipe | trajectory flow method | vertical discharging pipe | weir_
 
Functions to compute discharge from the trajectory of horizontal and vertical flowing pipes using U.S. Bureau of Reclamation methods.
679
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 ___
 **[Water / utc2nwislocal](https://code.usgs.gov/water/utc2nwislocal)**
681
_Updated: 2021-08-01T23:59:38.520Z_
682
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_Tags: Coordinated Universal Time | NWIS | National Water Information System | UTC | time zone_
 
A light-weight, dependency-free R package to compute UTC offsets from U.S. Geological Survey National Water Information System (NWIS) time-zone codes. NWIS time-zone codes are not recognized in base R that uses the Olson Names scheme.
685
686
 ___
 **[Water Mission Area / Internet of Water / waterdataui](https://code.usgs.gov/wma/iow/waterdataui)**
687
_Updated: 2022-01-25T09:12:28.272Z_
688
689
 
Water Data For the Nation Site Pages
690
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 ___
 **[Water Mission Area / Internet of Water / wdfn-viz](https://code.usgs.gov/wma/iow/wdfn-viz)**
692
_Updated: 2022-01-25T09:15:33.275Z_
693
694
 
Node installable package to provide visual identification for Water Data for the Nation pages
695
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 ___
 **[Water Mission Area / nhgf / GFv2.0](https://code.usgs.gov/wma/nhgf/gfv2.0)**
697
_Updated: 2022-01-21T18:29:06.309Z_
698
699
 
Workflow and code for development of Geospatial Fabric version 2.0
700
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 ___
 **[Water Mission Area / nhgf / PyGDP](https://code.usgs.gov/wma/nhgf/pyGDP)**
702
_Updated: 2022-01-25T19:31:51.982Z_
703
704
 ___
 **[Water Mission Area / nhgf / ToolsTeam / nldi-flowtools](https://code.usgs.gov/wma/nhgf/toolsteam/nldi-flowtools)**
705
_Updated: 2022-01-24T23:12:38.760Z_
706
707
 ___
 **[Water Mission Area / nhgf / ToolsTeam / nldi-xstool](https://code.usgs.gov/wma/nhgf/toolsteam/nldi-xstool)**
708
_Updated: 2022-01-18T22:13:40.044Z_
709
710
 ___
 **[Water Mission Area / nhgf / mainstems](https://code.usgs.gov/wma/nhgf/mainstems)**
711
_Updated: 2021-11-16T21:36:14.573Z_
712
713
 ___
 **[Water Mission Area / nhgf / pygeoapi](https://code.usgs.gov/wma/nhgf/pygeoapi)**
714
_Updated: 2022-01-25T15:09:57.600Z_
715
716
 ___
 **[Water Mission Area / nhgf / pygeoapi-plugin-cookiecutter](https://code.usgs.gov/wma/nhgf/pygeoapi-plugin-cookiecutter)**
717
_Updated: 2021-12-14T15:57:54.471Z_
718
719
 
Cookiecutter project for creating new pygeoapi-plugins.
720
721
 ___
 **[WaveLab / WaveLab](https://code.usgs.gov/wavelab/wavelab)**
722
_Updated: 2021-10-04T20:54:38.872Z_
723
724
725
726
727
 ___
 **[Wetland and Aquatic Research Center / eDNAOccupancy](https://code.usgs.gov/wetland-and-aquatic-research-center/ednaoccupancy)**
_Updated: 2020-06-23T17:21:41.233Z_
 ___
 **[Wildlife Telemetry Toolkit / telemetry code and collaborations](https://code.usgs.gov/wildlife-telemetry-toolkit/telemetry-code-and-collaborations)**
728
_Updated: 2020-08-26T19:24:56.618Z_
729
730
731
732
 
Provisional code for use by project collaborators and to further development.
 ___
 **[cmgp / bi-transect-extractor](https://code.usgs.gov/cmgp/bi-transect-extractor)**
733
_Updated: 2021-10-13T21:26:32.336Z_
734
735
 ___
 **[cmgp / squid5-software](https://code.usgs.gov/cmgp/squid5-software)**
736
_Updated: 2021-10-13T22:05:59.013Z_
737
738
 ___
 **[coawstmodel / COAWST](https://code.usgs.gov/coawstmodel/COAWST)**
739
_Updated: 2021-05-10T19:41:18.833Z_
740
741
742
743
744
 
Coupled-Ocean-Atmosphere-Wave Sediment Transport Modeling System src code
 ___
 **[espa / bulk-downloader](https://code.usgs.gov/espa/bulk-downloader)**
_Updated: 2020-05-15T14:23:36.725Z_
745
746
747
 ___
 **[espa / espa-notebooks](https://code.usgs.gov/espa/espa-notebooks)**
_Updated: 2021-06-02T14:43:14.992Z_
748
749
 ___
 **[espa / landsat-qa-arcgis-toolbox](https://code.usgs.gov/espa/landsat-qa-arcgis-toolbox)**
750
_Updated: 2021-04-28T19:46:51.997Z_
751
752
 
The Landsat QA ArcGIS Toolbox contains functionality to classify and/or extract bit-packed values from QA bands, which enhance the applications of interpretation, mapping, and applying QA values to Landsat data products.
753
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757
 ___
 **[fort / NABat / nabatr](https://code.usgs.gov/fort/nabat/nabatr)**
_Updated: 2021-05-17T14:54:32.156Z_
 
R software package used to pull, reformat, and push data from/to the North American Bat Monitoring Database.  NABatR uses a GQL API authentication layer setup to interact with the NABat Database.
758
759
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761
762
 ___
 **[fort / ecosystems-grit](https://code.usgs.gov/fort/ecosystems-grit)**
_Updated: 2018-09-11T21:46:58.694Z_
 
Geospatial Route Interface Tool
763
764
765
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767
 ___
 **[fort / ecosystems-grsg_lekdb](https://code.usgs.gov/fort/ecosystems-grsg_lekdb)**
_Updated: 2021-06-01T22:16:53.303Z_
 
Greater sage-grouse national lek database: grsg_lekdb
768
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772
773
774
775
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777
 ___
 **[fort / ecosystems-popcluster](https://code.usgs.gov/fort/ecosystems-popcluster)**
_Updated: 2019-09-04T13:14:07.281Z_
 
Hierarchically nested groupings of similar habitats associated with field surveys while considering biological structure/connectedness (movements between habitats) to be used with analyzing population demographic data.
 ___
 **[fort / whas](https://code.usgs.gov/fort/whas)**
_Updated: 2020-01-14T20:34:49.587Z_
 
wild horse aerial survey
778
779
 ___
 **[ghsc / Earthquake Geology Project / Slip Time Earthquake Path Simulations / STEPS-SAF-TJH](https://code.usgs.gov/ghsc/eqgeo/STEPS/steps-saf-tjh)**
780
_Updated: 2021-11-29T14:28:50.981Z_
781
 
782
These codes simulate potential earthquakes between observation points of dated offset features (field measurements) (Hatem et al, 2021; G-Cubed). The main output is an uncertainty distribution of geologic slip rate based on simulated events. 
783
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787
 ___
 **[ghsc / Engineering Seismology and Impacts / Groundfailure / gfail_lifelines](https://code.usgs.gov/ghsc/esi/groundfailure/gfail_lifelines)**
_Updated: 2021-05-18T16:53:24.263Z_
 
Codes for estimating impacts to infrastructure from earthquake-triggered ground failure in near-real-time using the USGS ground failure product probability maps. Currently only one module. gfroads estimates the road blockage probability.
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 **[ghsc / Engineering Seismology and Impacts / dyfi](https://code.usgs.gov/ghsc/esi/dyfi)**
790
_Updated: 2021-06-14T18:23:43.592Z_
791
792
 
DYFI (PyDYFI) new DYFI version 4 implemented in Python
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 **[ghsc / Engineering Seismology and Impacts / shakemap-sampling-tool](https://code.usgs.gov/ghsc/esi/shakemap-sampling-tool)**
795
_Updated: 2022-01-20T17:44:33.405Z_
796
797
 
Sample the online ShakeMap at input coordinates.
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800
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 **[ghsc / Engineering and Risk Project / design-batch-processor](https://code.usgs.gov/ghsc/erp/design-batch-processor)**
_Updated: 2019-08-19T00:10:05.781Z_
 
Desktop application for making batch requests to the earthquake-design-ws web services.
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 **[ghsc / Hazards Development Team / earthquake-design-ws](https://code.usgs.gov/ghsc/hazdev/earthquake-design-ws)**
805
_Updated: 2022-01-12T16:14:51.742Z_
806
807
 
Web service provided by the U.S. Geological Survey for computing seismic design parameters compatible with various building code reference documents.
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 **[ghsc / Hazards Development Team / earthquake-event-ws](https://code.usgs.gov/ghsc/hazdev/earthquake-event-ws)**
810
_Updated: 2022-01-25T17:58:43.080Z_
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812
 
Web service and data feeds for seismic event data
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 **[ghsc / Hazards Development Team / earthquake-eventadmin](https://code.usgs.gov/ghsc/hazdev/earthquake-eventadmin)**
815
_Updated: 2022-01-20T17:16:44.742Z_
816
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 **[ghsc / Hazards Development Team / earthquake-geoserve-ui](https://code.usgs.gov/ghsc/hazdev/earthquake-geoserve-ui)**
818
_Updated: 2021-10-19T15:15:21.640Z_
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 **[ghsc / Hazards Development Team / earthquake-hazard-tool](https://code.usgs.gov/ghsc/hazdev/earthquake-hazard-tool)**
821
_Updated: 2021-01-22T20:11:05.034Z_
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 **[ghsc / Hazards Development Team / earthquake-latest-earthquakes](https://code.usgs.gov/ghsc/hazdev/earthquake-latest-earthquakes)**
824
_Updated: 2022-01-07T18:31:04.768Z_
825
826
 
Interactive map and list web application
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 **[ghsc / Hazards Development Team / earthquake-network-operations](https://code.usgs.gov/ghsc/hazdev/earthquake-network-operations)**
829
_Updated: 2022-01-20T17:16:06.390Z_
830
831
 
Seismic network operations monitoring pages.
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 **[ghsc / Hazards Development Team / earthquake-rtgm-calculator](https://code.usgs.gov/ghsc/hazdev/earthquake-rtgm-calculator)**
834
_Updated: 2021-07-15T19:33:42.266Z_
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836
 
Web application for calculating risk targeted ground motions and risk coefficients from hazard curves.
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 **[ghsc / Hazards Development Team / earthquake-website](https://code.usgs.gov/ghsc/hazdev/earthquake-website)**
839
_Updated: 2022-01-24T15:33:00.515Z_
840
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 **[ghsc / Hazards Development Team / hazdev-basemap](https://code.usgs.gov/ghsc/hazdev/hazdev-basemap)**
842
_Updated: 2020-10-15T18:47:11.343Z_
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844
 
Tile overlays used in hazdev applications.
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 **[ghsc / Hazards Development Team / hazdev-geoserve-ws](https://code.usgs.gov/ghsc/hazdev/hazdev-geoserve-ws)**
847
_Updated: 2021-03-02T17:30:26.106Z_
848
849
 
Geoserve
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 **[ghsc / Hazards Development Team / hazdev-template](https://code.usgs.gov/ghsc/hazdev/hazdev-template)**
852
_Updated: 2021-11-01T19:41:31.992Z_
853
854
 
Lightweight php template framework
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 **[ghsc / Hazards Development Team / legacy-latest-earthquakes](https://code.usgs.gov/ghsc/hazdev/legacy-latest-earthquakes)**
857
_Updated: 2020-11-16T18:26:50.949Z_
858
859
 
Mobile friendly, interactive earthquake map and list application.
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 **[ghsc / Landslide Hazards Program / DF_Growth](https://code.usgs.gov/ghsc/lhp/df_growth)**
_Updated: 2020-08-04T20:26:31.212Z_
 
Uses empirical debris-growth functions to forecast debris-flow inundation.
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 **[ghsc / Landslide Hazards Program / HydroMet](https://code.usgs.gov/ghsc/lhp/hydromet)**
867
_Updated: 2021-05-19T18:30:35.303Z_
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869
 
Repository for the program HydroMet, developed by Jacob Conrad under the supervision of Ben Mirus and Rex Baum. 
870
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 **[ghsc / Landslide Hazards Program / Landslide thresholds](https://code.usgs.gov/ghsc/lhp/landslide-thresholds)**
_Updated: 2019-11-13T23:24:28.933Z_
 
Track precipitation and hydrological thresholds for landslide occurrence
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 **[ghsc / Landslide Hazards Program / kw-flow-model](https://code.usgs.gov/ghsc/lhp/kw-flow-model)**
877
_Updated: 2021-06-10T18:48:56.044Z_
878
879
 
Simulate overland flow primarily in burned areas
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 **[ghsc / Landslide Hazards Program / landslides-website](https://code.usgs.gov/ghsc/lhp/landslides-website)**
882
_Updated: 2022-01-10T17:03:52.188Z_
883
884
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 **[ghsc / Landslide Hazards Program / lsforce](https://code.usgs.gov/ghsc/lhp/lsforce)**
885
_Updated: 2022-01-25T00:46:27.865Z_
886
887
 
A Python-based single-force seismic inversion framework for massive landslides
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 **[ghsc / Landslide Hazards Program / soil_depth](https://code.usgs.gov/ghsc/lhp/soil_depth)**
_Updated: 2021-12-03T22:47:19.419Z_
 
A computer program designed for estimating soil thickness over a digital landscape using various empirical and process-based models
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894
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 **[ghsc / National Earthquake Information Center / Algorithms / neic-traveltime](https://code.usgs.gov/ghsc/neic/algorithms/neic-traveltime)**
895
_Updated: 2022-01-03T20:22:36.112Z_
896
897
 
Port of the NEIC 'TTimes' libraries from FORTRAN77 to Java
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 **[ghsc / National Earthquake Information Center / Utilities / catalog-qc](https://code.usgs.gov/ghsc/neic/utilities/catalog-qc)**
900
_Updated: 2020-08-27T22:13:49.633Z_
901
902
903
904
 
Tools for catalog quality check
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 **[ghsc / National Earthquake Information Center / neic-machine-learning](https://code.usgs.gov/ghsc/neic/neic-machine-learning)**
905
_Updated: 2021-02-26T17:20:22.467Z_
906
907
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 **[ghsc / National Earthquake Information Center / neic-synthetic-depth-phase-modeling](https://code.usgs.gov/ghsc/neic/syndepth)**
908
_Updated: 2021-11-24T20:27:02.414Z_
909
910
911
_Tags: Source Characteriztion_
 
Python tool for Green's function-based  SYNthetic based DEPTH phase modeling (SynDepth). 
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 **[ghsc / National Earthquake Information Center / slab2cloud](https://code.usgs.gov/ghsc/neic/slab2cloud)**
914
_Updated: 2021-09-10T18:01:29.575Z_
915
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 **[ghsc / National Geomagnetism Program / Electromagnetic Transfer Functions / EMTF FCU](https://code.usgs.gov/ghsc/geomag/emtf/fcu)**
_Updated: 2020-07-13T21:24:01.544Z_
 
Electromagnetic Transfer Functions File Conversion Utilities (EMTF FCU), (C) 2007-2018 Anna Kelbert, is a set of Fortran 90 routines for electromagnetic transfer function file conversion and rotation.
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 **[ghsc / National Geomagnetism Program / geomag-algorithms](https://code.usgs.gov/ghsc/geomag/geomag-algorithms)**
922
_Updated: 2021-11-30T18:42:07.173Z_
923
924
 
Library for processing Geomagnetic timeseries data.
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 **[ghsc / National Geomagnetism Program / geomag-imp](https://code.usgs.gov/ghsc/geomag/geomag-imp)**
927
_Updated: 2020-11-02T23:36:22.895Z_
928
929
 
Python 3 library for interpolating/imputing geomagnetic field perturbations.
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 **[ghsc / National Geomagnetism Program / geomag-web-absolutes](https://code.usgs.gov/ghsc/geomag/geomag-web-absolutes)**
932
_Updated: 2022-01-20T17:15:48.987Z_
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 **[ghsc / National Geomagnetism Program / geomag-website](https://code.usgs.gov/ghsc/geomag/geomag-website)**
935
_Updated: 2020-11-09T21:36:58.688Z_
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937
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 **[ghsc / National Seismic Hazard Model Project / National Crustal Model / GeoFram](https://code.usgs.gov/ghsc/nshmp/ncm/GeoFram)**
938
_Updated: 2021-07-01T22:11:59.203Z_
939
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941
942
 
Set of utilities to extract geology profiles and related information from the NCM geologic framework.
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 **[ghsc / National Seismic Hazard Model Project / National Crustal Model / GeoPhys](https://code.usgs.gov/ghsc/nshmp/ncm/GeoPhys)**
943
_Updated: 2021-07-01T22:13:01.977Z_
944
945
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947
 
Utilities to extract geophysical information from the NCM.
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 **[ghsc / National Seismic Hazard Model Project / National Crustal Model / MinVel](https://code.usgs.gov/ghsc/nshmp/ncm/MinVel)**
948
_Updated: 2021-07-01T22:13:42.621Z_
949
950
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952
 
Utility to calculate mineral and mineral aggregate moduli and density at specified temperatures and pressures.
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 **[ghsc / National Seismic Hazard Model Project / National Crustal Model / TherMod](https://code.usgs.gov/ghsc/nshmp/ncm/TherMod)**
953
_Updated: 2021-07-01T22:15:43.143Z_
954
955
 
Utilities to extract temperature profiles and related information from the NCM thermal model.
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 **[ghsc / National Seismic Hazard Model Project / National Crustal Model / ncm-database](https://code.usgs.gov/ghsc/nshmp/ncm/ncm-database)**
958
_Updated: 2021-12-17T15:42:10.882Z_
959
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 **[ghsc / National Seismic Hazard Model Project / cusvm](https://code.usgs.gov/ghsc/nshmp/cusvm)**
_Updated: 2021-09-03T19:42:28.945Z_
 
Central U.S. Velocity Model
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 **[ghsc / National Seismic Hazard Model Project / nshm-fault-sections](https://code.usgs.gov/ghsc/nshmp/nshm-fault-sections)**
966
_Updated: 2022-01-25T15:58:10.036Z_
967
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969
_Tags: active faults | earthquake source | seismic hazard_
 
Database of geologic fault sections used in National Seismic Hazard Models (NSHMs)
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 **[lcmap / 1_LCMAP_Access](https://code.usgs.gov/lcmap/1_lcmap_access)**
972
_Updated: 2022-01-19T20:28:09.260Z_
973
974
 
Getting Started with LCMAP in Python: Chapter 1 demonstrates how to perform spatiotemporal queries for LCMAP data by submitting requests to the USGS EarthExplorer's (EE) Machine-to-Machine (M2M) API, and how to download and unzip LCMAP tile bundles.
975
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 **[lcmap / pyccd](https://code.usgs.gov/lcmap/pyccd)**
977
_Updated: 2021-07-28T13:16:36.095Z_
978
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980
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982
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 **[lcmap / research / Harmonic Adaptive Penalty Operator HAPO ](https://code.usgs.gov/lcmap/research/Harmonic-Adaptive-Penalty-Operator-HAPO-)**
_Updated: 2021-12-20T16:55:38.164Z_
 
HAPO introduced a new penalty function to minimize unnecessary fluctuations in the harmonic regression model, reducing the over-fitting issue in time series.
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 **[lcmap / research / ard-gap-filler](https://code.usgs.gov/lcmap/research/ard-gap-filler)**
_Updated: 2020-06-03T20:41:14.317Z_
986
987
988
 ___
 **[nmic / mapmark4_shiny](https://code.usgs.gov/nmic/mapmark4_shiny)**
_Updated: 2021-04-21T15:14:27.017Z_
989
990
991
992
993
994
995
 ___
 **[usgs / DAR_Magnetotelluric](https://code.usgs.gov/usgs/DAR_Magnetotelluric)**
_Updated: 2018-05-14T21:42:48.057Z_
 
Software to Process and Preserve Legacy Magnetotelluric Data
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 **[usgs / MetadataWizard](https://code.usgs.gov/usgs/fort-pymdwizard)**
996
_Updated: 2021-06-30T20:09:26.540Z_
997
998
999
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1001
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1005
_Tags: BDP | CSDGM | Data management | FGDC | XML | metadata_
 
The user manual can be found at: https://usgs.github.io/fort-pymdwizard/

Installers can be downloaded from:  https://github.com/usgs/fort-pymdwizard/releases

Bugs and Improvements can be submitted at: https://github.com/usgs/fort-pymdwizard/issues
 ___
 **[usgs / NOROCK / Cross_P / cwdsims](https://code.usgs.gov/usgs/norock/cross_p/cwdsims)**
1006
_Updated: 2022-01-21T16:28:11.785Z_
1007
1008
1009
1010
_Tags: R | chronic wasting disease | shiny | wildlife disease_
 
An R package to simulate chronic wasting disease dynamics. See the Readme file below for installation instructions. 

1011
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1015
 ___
 **[usgs / NOROCK / Graves_T / WildAgg](https://code.usgs.gov/usgs/norock/graves_t/wildagg)**
_Updated: 2021-05-09T13:05:57.408Z_
 
WildAgg is an R package designed to estimate, summarize, and visualize wildlife aggregation metrics using location information like GPS collar data.
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 **[usgs / NOROCK / Irvine_K / ip-086589](https://code.usgs.gov/usgs/norock/irvine_k/ip-086589)**
_Updated: 2019-12-10T17:41:17.104Z_
 
Code release for Zero-augmented beta (ZAB) and Zero-augmented beta with observation errors (ZABE) models 
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 **[usgs / NOROCK / Irvine_K / ip-092119](https://code.usgs.gov/usgs/norock/irvine_k/ip-092119)**
_Updated: 2019-12-10T17:36:51.104Z_
 
Code release for fitting occupancy models with design weights
 ___
 **[usgs / NOROCK / Irvine_K / ip-092225](https://code.usgs.gov/usgs/norock/irvine_k/ip-092225)**
_Updated: 2019-12-10T17:29:34.148Z_
 
Code release for simulation based power analysis using false positive occupancy model (Observation Confirmation Model)
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 **[usgs / NOROCK / Irvine_K / ip-097746](https://code.usgs.gov/usgs/norock/irvine_k/ip-097746)**
_Updated: 2019-12-10T17:34:35.720Z_
 
R package to conduct simulation based power analysis with dynamic occupancy models
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 **[usgs / NOROCK / Irvine_K / ip-106111](https://code.usgs.gov/usgs/norock/irvine_k/ip-106111)**
_Updated: 2019-12-10T17:40:24.715Z_
 
Supplement S1: Code Release for fitting OZAB and OZABE to Empirical Datasets in "Cohesive Framework for Modeling Plant Cover Class Data" published in Methods in Ecology and Evolution
 ___
 **[usgs / NOROCK / Irvine_K / ip-108057](https://code.usgs.gov/usgs/norock/irvine_k/ip-108057)**
_Updated: 2019-12-10T17:26:04.550Z_
 
Code release for bat data analyses presented in "Modelling misclassification in multi-species acoustic data when estimating occupancy and relative activity"
1046
1047
 ___
 **[usgs / Project Explorer](https://code.usgs.gov/usgs/project-explorer)**
1048
_Updated: 2022-01-25T00:04:18.735Z_
1049
1050
1051
_Tags: Inventory | M-16-21 | OSS | Open Source | USGS_
 
Explore publicly released USGS software products.
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1068
 ___
 **[usgs / gmeg-shearzone-flowstress](https://code.usgs.gov/usgs/gmeg-shearzone-flowstress)**
_Updated: 2018-02-26T19:19:13.613Z_
 
Flow Stress calculations for quartz paleopiezometery to estimate strain and slip rates.
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 **[usgs / landslides-metadata](https://code.usgs.gov/usgs/landslides-metadata)**
_Updated: 2018-07-19T16:58:23.087Z_
 
Automate production of metadata following the USGS geospatial metadata format
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 **[usgs / landslides-trigrs](https://code.usgs.gov/usgs/landslides-trigrs)**
_Updated: 2018-03-02T18:28:17.734Z_
 ___
 **[usgs / whcmsc-rdc](https://code.usgs.gov/usgs/whcmsc-rdc)**
_Updated: 2018-03-08T19:31:27.624Z_
 ___
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 > 226 Total Public Projects
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> Last Updated: Wed, 26 Jan 2022 00:04:14 GMT