Known issues in 1.2.0
Stress testing from users has exposed the following problems:
-
Migrating from 1.1.4
to1.2.0
with an.h5
file containing deleted families causes issues when trying to delete more families with1.2.0
(various dimension mismatch complaints). - Likely user error falling back to1.1.4
after updating to1.2.0
since it isn't backwards compatible. -
On long runs, the following ValueError
from OPTICS will sometimes be thrown:2 neighbors per samples are required, but some samples have only 1 neighbors in precomputed graph matrix. Decrease number of neighbors used or recompute the graph with more neighbors.
Problem with the correlation matrix? -
Newer versions of Bokeh throw UserWarning: no explicit representation of timezones available for np.datetime64
. -
Users on Windows are unable to overwrite existing family images in outputs. Just need to replace os.rename()
withos.replace()
.
Edited by Hotovec-Ellis, Alicia Jean