diff --git a/inst/doc/dataRetrieval.pdf b/inst/doc/dataRetrieval.pdf new file mode 100644 index 0000000000000000000000000000000000000000..f62020ecfa6e09995d9db1351c3b6d48346e33b7 Binary files /dev/null and b/inst/doc/dataRetrieval.pdf differ diff --git a/vignettes/dataRetrieval.log b/vignettes/dataRetrieval.log index 44ac8aaeb3724a9d984aa1bc1d6d0eee8890d560..bfdd710bbf7a8d624264c341f44edb1c31ab07c8 100644 --- a/vignettes/dataRetrieval.log +++ b/vignettes/dataRetrieval.log @@ -1,4 +1,4 @@ -This is pdfTeX, Version 3.1415926-2.5-1.40.14 (MiKTeX 2.9) (preloaded format=pdflatex 2014.8.7) 7 AUG 2014 15:12 +This is pdfTeX, Version 3.1415926-2.5-1.40.14 (MiKTeX 2.9) (preloaded format=pdflatex 2014.8.7) 8 AUG 2014 15:39 entering extended mode **dataRetrieval.tex (D:\LADData\RCode\dataRetrieval\vignettes\dataRetrieval.tex @@ -1022,7 +1022,7 @@ les (x86)/MiKTeX 2.9/fonts/type1/urw/courier/ucrb8a.pfb><C:/Program Files (x86) rw/helvetic/uhvr8a.pfb><C:/Program Files (x86)/MiKTeX 2.9/fonts/type1/urw/times /utmr8a.pfb><C:/Program Files (x86)/MiKTeX 2.9/fonts/type1/urw/times/utmri8a.pf b> -Output written on dataRetrieval.pdf (33 pages, 335871 bytes). +Output written on dataRetrieval.pdf (33 pages, 335873 bytes). PDF statistics: 484 PDF objects out of 1000 (max. 8388607) 84 named destinations out of 1000 (max. 500000) diff --git a/vignettes/dataRetrieval.pdf b/vignettes/dataRetrieval.pdf index 121a970968e645f462b99cae36542d467c1eb587..f62020ecfa6e09995d9db1351c3b6d48346e33b7 100644 Binary files a/vignettes/dataRetrieval.pdf and b/vignettes/dataRetrieval.pdf differ diff --git a/vignettes/dataRetrieval.synctex.gz b/vignettes/dataRetrieval.synctex.gz index 74addaa42cc7dbf244507b931f82d84dffb85dbf..0efeab0b128c449044f46dcc6562e90a11ae750f 100644 Binary files a/vignettes/dataRetrieval.synctex.gz and b/vignettes/dataRetrieval.synctex.gz differ diff --git a/vignettes/dataRetrieval.tex b/vignettes/dataRetrieval.tex index 3a658a680f1d8e00378e10602010e21bfb381180..8b083b15c8674991b1e26c71ced91d24735c6d89 100644 --- a/vignettes/dataRetrieval.tex +++ b/vignettes/dataRetrieval.tex @@ -267,7 +267,7 @@ Not every station will measure all parameters. A short list of commonly measured % latex table generated in R 3.1.1 by xtable 1.7-3 package -% Thu Aug 07 15:11:38 2014 +% Fri Aug 08 15:39:28 2014 \begin{table}[ht] \caption{Common USGS Parameter Codes} \label{tab:params} @@ -330,7 +330,7 @@ For unit values data (sensor data measured at regular time intervals such as 15 Some common codes are shown in Table \ref{tab:stat}. % latex table generated in R 3.1.1 by xtable 1.7-3 package -% Thu Aug 07 15:11:39 2014 +% Fri Aug 08 15:39:30 2014 \begin{table}[ht] \caption{Commonly used USGS Stat Codes} \label{tab:stat} @@ -411,7 +411,7 @@ To discover what data is available for a particular USGS site, including measure % latex table generated in R 3.1.1 by xtable 1.7-3 package -% Thu Aug 07 15:11:39 2014 +% Fri Aug 08 15:39:30 2014 \begin{table}[ht] \caption{Daily mean data availabile at the Choptank River near Greensboro, MD. [Some columns deleted for space considerations]} \label{tab:gda} @@ -423,7 +423,7 @@ To discover what data is available for a particular USGS site, including measure & Temperature, water & 1988-10-01 & 2012-05-09 & 894 & deg C \\ [5pt] & Temperature, water & 2010-10-01 & 2012-05-09 & 529 & deg C \\ [5pt] & Temperature, water & 2010-10-01 & 2012-05-09 & 529 & deg C \\ - [5pt] & Stream flow, mean. daily & 1948-01-01 & 2014-08-06 & 24325 & ft$^3$/s \\ + [5pt] & Stream flow, mean. daily & 1948-01-01 & 2014-08-07 & 24326 & ft$^3$/s \\ [5pt] & Specific conductance & 2010-10-01 & 2012-05-09 & 527 & uS/cm @25C \\ [5pt] & Specific conductance & 2010-10-01 & 2012-05-09 & 527 & uS/cm @25C \\ [5pt] & Specific conductance & 2010-10-01 & 2012-05-09 & 527 & uS/cm @25C \\ @@ -789,7 +789,7 @@ There are 4750 data points, and 4750 days. % latex table generated in R 3.1.1 by xtable 1.7-3 package -% Thu Aug 07 15:11:55 2014 +% Fri Aug 08 15:39:49 2014 \begin{table}[ht] \caption{Daily dataframe} \label{tab:DailyDF1} @@ -910,7 +910,7 @@ To illustrate how the dataRetrieval package handles a more complex censoring pro % latex table generated in R 3.1.1 by xtable 1.7-3 package -% Thu Aug 07 15:11:56 2014 +% Fri Aug 08 15:39:50 2014 \begin{table}[ht] \caption{Example data} \label{tab:exampleComplexQW} @@ -1114,20 +1114,20 @@ There are 4750 data points, and 4750 days. \hlkwd{head}\hlstd{(Sample)} \end{alltt} \begin{verbatim} - Date ConcLow ConcHigh Uncen ConcAve Julian Month -1 2000-01-04 1.59 1.59 1 1.59 54789 1 -2 2000-02-03 1.54 1.54 1 1.54 54819 2 -3 2000-02-15 1.37 1.37 1 1.37 54831 2 -4 2000-02-19 1.24 1.24 1 1.24 54835 2 -5 2000-03-23 0.52 0.52 1 0.52 54868 3 -6 2000-06-05 1.11 1.11 1 1.11 54942 6 - Day DecYear MonthSeq SinDY CosDY Q LogQ -1 4 2000 1801 0.06005 0.9982 2.747 1.0104 -2 34 2000 1802 0.54392 0.8391 3.936 1.3702 -3 46 2000 1802 0.70407 0.7101 10.845 2.3837 -4 50 2000 1802 0.75113 0.6602 15.518 2.7420 -5 83 2000 1803 0.98809 0.1539 56.917 4.0416 -6 157 2000 1806 0.43940 -0.8983 1.812 0.5946 + Date Q LogQ ConcLow ConcHigh Uncen ConcAve +1 2000-01-04 2.747 1.0104 1.59 1.59 1 1.59 +2 2000-02-03 3.936 1.3702 1.54 1.54 1 1.54 +3 2000-02-15 10.845 2.3837 1.37 1.37 1 1.37 +4 2000-02-19 15.518 2.7420 1.24 1.24 1 1.24 +5 2000-03-23 56.917 4.0416 0.52 0.52 1 0.52 +6 2000-06-05 1.812 0.5946 1.11 1.11 1 1.11 + Julian Month Day DecYear MonthSeq SinDY CosDY +1 54789 1 4 2000 1801 0.06005 0.9982 +2 54819 2 34 2000 1802 0.54392 0.8391 +3 54831 2 46 2000 1802 0.70407 0.7101 +4 54835 2 50 2000 1802 0.75113 0.6602 +5 54868 3 83 2000 1803 0.98809 0.1539 +6 54942 6 157 2000 1806 0.43940 -0.8983 \end{verbatim} \end{kframe} \end{knitrout} @@ -1351,7 +1351,7 @@ There are a few steps that are required in order to create a table in a Microsof 5 Suspended sediment discharge 1980-10-01 End Count Units 1 2012-05-09 529 deg C -2 2014-08-06 24325 ft3/s +2 2014-08-07 24326 ft3/s 3 2012-05-09 527 uS/cm @25C 4 1991-09-30 3651 mg/l 5 1991-09-30 3652 tons/day diff --git a/vignettes/figure/egretEx.pdf b/vignettes/figure/egretEx.pdf index 9e4cef31d760dfcd56f294494ecaa856ce4a911f..87cadec1ad3a1be69335e470820ad297f6615779 100644 Binary files a/vignettes/figure/egretEx.pdf and b/vignettes/figure/egretEx.pdf differ diff --git a/vignettes/figure/getNWIStemperaturePlot.pdf b/vignettes/figure/getNWIStemperaturePlot.pdf index c1cac171ce1c3dcaa557188aba0b08aad2fceabe..11f6561a856572a7bb74beb0de5ec46354895305 100644 Binary files a/vignettes/figure/getNWIStemperaturePlot.pdf and b/vignettes/figure/getNWIStemperaturePlot.pdf differ diff --git a/vignettes/figure/getQWtemperaturePlot.pdf b/vignettes/figure/getQWtemperaturePlot.pdf index f42c91320748d079696f17a5d6ed9f3726146438..566673982144aab433d72e83444eb92dc9bf15f5 100644 Binary files a/vignettes/figure/getQWtemperaturePlot.pdf and b/vignettes/figure/getQWtemperaturePlot.pdf differ