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Issue sorted. Grid and masks are now stored in the project session JSON....

Engel, Frankrequested to merge
34-masking-polygons-are-not-save-or-maybe-just-aren-t-loaded-in-a-project-session-ivy-file into main

Issue sorted. Grid and masks are now stored in the project session JSON. Project load regenerates them as specified. Also now we create a binary mask and save it to the project structure.

Closes #34 (closed)

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