Skip to content
Snippets Groups Projects
dataRetrieval.log 33.7 KiB
Newer Older
  • Learn to ignore specific revisions
  • Laura A DeCicco's avatar
    Laura A DeCicco committed
    This is pdfTeX, Version 3.1415926-2.3-1.40.12 (MiKTeX 2.9) (preloaded format=pdflatex 2012.1.6)  20 NOV 2013 14:07
    
    entering extended mode
    **dataRetrieval.tex
    (D:\LADData\RCode\dataRetrieval\vignettes\dataRetrieval.tex
    LaTeX2e <2011/06/27>
    Babel <v3.8m> and hyphenation patterns for english, afrikaans, ancientgreek, ar
    abic, armenian, assamese, basque, bengali, bokmal, bulgarian, catalan, coptic, 
    croatian, czech, danish, dutch, esperanto, estonian, farsi, finnish, french, ga
    lician, german, german-x-2009-06-19, greek, gujarati, hindi, hungarian, iceland
    ic, indonesian, interlingua, irish, italian, kannada, kurmanji, lao, latin, lat
    vian, lithuanian, malayalam, marathi, mongolian, mongolianlmc, monogreek, ngerm
    an, ngerman-x-2009-06-19, nynorsk, oriya, panjabi, pinyin, polish, portuguese, 
    romanian, russian, sanskrit, serbian, slovak, slovenian, spanish, swedish, swis
    sgerman, tamil, telugu, turkish, turkmen, ukenglish, ukrainian, uppersorbian, u
    senglishmax, welsh, loaded.
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\base\article.cls"
    Document Class: article 2007/10/19 v1.4h Standard LaTeX document class
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\base\size11.clo"
    File: size11.clo 2007/10/19 v1.4h Standard LaTeX file (size option)
    )
    \c@part=\count79
    \c@section=\count80
    \c@subsection=\count81
    \c@subsubsection=\count82
    \c@paragraph=\count83
    \c@subparagraph=\count84
    \c@figure=\count85
    \c@table=\count86
    \abovecaptionskip=\skip41
    \belowcaptionskip=\skip42
    \bibindent=\dimen102
    )
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\graphics\graphicx.sty"
    Package: graphicx 1999/02/16 v1.0f Enhanced LaTeX Graphics (DPC,SPQR)
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\graphics\keyval.sty"
    Package: keyval 1999/03/16 v1.13 key=value parser (DPC)
    \KV@toks@=\toks14
    )
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\graphics\graphics.sty"
    Package: graphics 2009/02/05 v1.0o Standard LaTeX Graphics (DPC,SPQR)
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\graphics\trig.sty"
    Package: trig 1999/03/16 v1.09 sin cos tan (DPC)
    )
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\00miktex\graphics.cfg"
    File: graphics.cfg 2007/01/18 v1.5 graphics configuration of teTeX/TeXLive
    )
    Package graphics Info: Driver file: pdftex.def on input line 91.
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\pdftex-def\pdftex.def"
    File: pdftex.def 2011/05/27 v0.06d Graphics/color for pdfTeX
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\generic\oberdiek\infwarerr.sty"
    Package: infwarerr 2010/04/08 v1.3 Providing info/warning/message (HO)
    )
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\generic\oberdiek\ltxcmds.sty"
    Package: ltxcmds 2011/04/18 v1.20 LaTeX kernel commands for general use (HO)
    )
    \Gread@gobject=\count87
    ))
    \Gin@req@height=\dimen103
    \Gin@req@width=\dimen104
    )
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\graphics\color.sty"
    Package: color 2005/11/14 v1.0j Standard LaTeX Color (DPC)
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\00miktex\color.cfg"
    File: color.cfg 2007/01/18 v1.5 color configuration of teTeX/TeXLive
    )
    Package color Info: Driver file: pdftex.def on input line 130.
    )
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\framed\framed.sty
    Package: framed 2011/10/22 v 0.96: framed or shaded text with page breaks
    \OuterFrameSep=\skip43
    \fb@frw=\dimen105
    \fb@frh=\dimen106
    \FrameRule=\dimen107
    \FrameSep=\dimen108
    )
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\base\alltt.sty"
    Package: alltt 1997/06/16 v2.0g defines alltt environment
    )
    
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\amsmath\amsmath.sty
    Package: amsmath 2013/01/14 v2.14 AMS math features
    
    \@mathmargin=\skip44
    
    
    For additional information on amsmath, use the `?' option.
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\amsmath\amstext.sty
    Package: amstext 2000/06/29 v2.01
    
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\amsmath\amsgen.sty
    File: amsgen.sty 1999/11/30 v2.0
    
    \@emptytoks=\toks15
    \ex@=\dimen109
    
    ))
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\amsmath\amsbsy.sty
    Package: amsbsy 1999/11/29 v1.2d
    
    \pmbraise@=\dimen110
    
    )
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\amsmath\amsopn.sty
    Package: amsopn 1999/12/14 v2.01 operator names
    )
    
    \inf@bad=\count88
    
    LaTeX Info: Redefining \frac on input line 210.
    
    \uproot@=\count89
    \leftroot@=\count90
    
    LaTeX Info: Redefining \overline on input line 306.
    
    \classnum@=\count91
    \DOTSCASE@=\count92
    
    LaTeX Info: Redefining \ldots on input line 378.
    LaTeX Info: Redefining \dots on input line 381.
    LaTeX Info: Redefining \cdots on input line 466.
    \Mathstrutbox@=\box26
    \strutbox@=\box27
    
    \big@size=\dimen111
    
    LaTeX Font Info:    Redeclaring font encoding OML on input line 566.
    LaTeX Font Info:    Redeclaring font encoding OMS on input line 567.
    
    \macc@depth=\count93
    \c@MaxMatrixCols=\count94
    
    \dotsspace@=\muskip10
    
    \c@parentequation=\count95
    \dspbrk@lvl=\count96
    \tag@help=\toks16
    \row@=\count97
    \column@=\count98
    \maxfields@=\count99
    \andhelp@=\toks17
    \eqnshift@=\dimen112
    \alignsep@=\dimen113
    \tagshift@=\dimen114
    \tagwidth@=\dimen115
    \totwidth@=\dimen116
    \lineht@=\dimen117
    \@envbody=\toks18
    \multlinegap=\skip45
    \multlinetaggap=\skip46
    \mathdisplay@stack=\toks19
    
    LaTeX Info: Redefining \[ on input line 2665.
    LaTeX Info: Redefining \] on input line 2666.
    )
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\psnfss\times.sty"
    Package: times 2005/04/12 PSNFSS-v9.2a (SPQR) 
    )
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\hyperref\hyperref.sty"
    Package: hyperref 2011/08/19 v6.82h Hypertext links for LaTeX
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\generic\oberdiek\hobsub-hyperref.sty"
    Package: hobsub-hyperref 2011/04/23 v1.4 Bundle oberdiek, subset hyperref (HO)
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\generic\oberdiek\hobsub-generic.sty"
    Package: hobsub-generic 2011/04/23 v1.4 Bundle oberdiek, subset generic (HO)
    Package: hobsub 2011/04/23 v1.4 Subsetting bundle oberdiek (HO)
    
    Package hobsub Info: Skipping package `infwarerr' (already loaded).
    Package hobsub Info: Skipping package `ltxcmds' (already loaded).
    
    Package: ifluatex 2010/03/01 v1.3 Provides the ifluatex switch (HO)
    Package ifluatex Info: LuaTeX not detected.
    Package: ifvtex 2010/03/01 v1.5 Switches for detecting VTeX and its modes (HO)
    Package ifvtex Info: VTeX not detected.
    Package: intcalc 2007/09/27 v1.1 Expandable integer calculations (HO)
    Package: ifpdf 2011/01/30 v2.3 Provides the ifpdf switch (HO)
    Package ifpdf Info: pdfTeX in PDF mode is detected.
    Package: etexcmds 2011/02/16 v1.5 Prefix for e-TeX command names (HO)
    Package etexcmds Info: Could not find \expanded.
    (etexcmds)             That can mean that you are not using pdfTeX 1.50 or
    (etexcmds)             that some package has redefined \expanded.
    (etexcmds)             In the latter case, load this package earlier.
    Package: kvsetkeys 2011/04/07 v1.13 Key value parser (HO)
    Package: kvdefinekeys 2011/04/07 v1.3 Defining keys (HO)
    Package: pdftexcmds 2011/04/22 v0.16 Utilities of pdfTeX for LuaTeX (HO)
    Package pdftexcmds Info: LuaTeX not detected.
    Package pdftexcmds Info: \pdf@primitive is available.
    Package pdftexcmds Info: \pdf@ifprimitive is available.
    Package pdftexcmds Info: \pdfdraftmode found.
    Package: pdfescape 2011/04/04 v1.12 Provides string conversions (HO)
    Package: bigintcalc 2011/01/30 v1.2 Expandable big integer calculations (HO)
    Package: bitset 2011/01/30 v1.1 Data type bit set (HO)
    Package: uniquecounter 2011/01/30 v1.2 Provides unlimited unique counter (HO)
    )
    Package hobsub Info: Skipping package `hobsub' (already loaded).
    Package: letltxmacro 2010/09/02 v1.4 Let assignment for LaTeX macros (HO)
    Package: hopatch 2011/01/30 v1.0 Wrapper for package hooks (HO)
    Package: xcolor-patch 2011/01/30 xcolor patch
    Package: atveryend 2011/04/23 v1.7 Hooks at very end of document (HO)
    Package: atbegshi 2011/01/30 v1.15 At begin shipout hook (HO)
    Package: refcount 2010/12/01 v3.2 Data extraction from references (HO)
    Package: hycolor 2011/01/30 v1.7 Color options of hyperref/bookmark (HO)
    )
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\generic\ifxetex\ifxetex.sty"
    Package: ifxetex 2010/09/12 v0.6 Provides ifxetex conditional
    )
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\oberdiek\kvoptions.sty"
    Package: kvoptions 2010/12/23 v3.10 Keyval support for LaTeX options (HO)
    )
    
    \@linkdim=\dimen118
    \Hy@linkcounter=\count100
    \Hy@pagecounter=\count101
    
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\hyperref\pd1enc.def"
    File: pd1enc.def 2011/08/19 v6.82h Hyperref: PDFDocEncoding definition (HO)
    )
    
    \Hy@SavedSpaceFactor=\count102
    
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\00miktex\hyperref.cfg"
    File: hyperref.cfg 2002/06/06 v1.2 hyperref configuration of TeXLive
    )
    Package hyperref Info: Hyper figures OFF on input line 4053.
    Package hyperref Info: Link nesting OFF on input line 4058.
    Package hyperref Info: Hyper index ON on input line 4061.
    Package hyperref Info: Plain pages OFF on input line 4068.
    Package hyperref Info: Backreferencing OFF on input line 4073.
    Package hyperref Info: Implicit mode ON; LaTeX internals redefined.
    Package hyperref Info: Bookmarks ON on input line 4291.
    
    \c@Hy@tempcnt=\count103
    
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\ltxmisc\url.sty"
    \Urlmuskip=\muskip11
    Package: url 2006/04/12  ver 3.3  Verb mode for urls, etc.
    )
    LaTeX Info: Redefining \url on input line 4644.
    
    \Fld@menulength=\count104
    \Field@Width=\dimen119
    \Fld@charsize=\dimen120
    
    Package hyperref Info: Hyper figures OFF on input line 5730.
    Package hyperref Info: Link nesting OFF on input line 5735.
    Package hyperref Info: Hyper index ON on input line 5738.
    Package hyperref Info: backreferencing OFF on input line 5745.
    Package hyperref Info: Link coloring OFF on input line 5750.
    Package hyperref Info: Link coloring with OCG OFF on input line 5755.
    Package hyperref Info: PDF/A mode OFF on input line 5760.
    LaTeX Info: Redefining \ref on input line 5800.
    LaTeX Info: Redefining \pageref on input line 5804.
    
    \Hy@abspage=\count105
    \c@Item=\count106
    \c@Hfootnote=\count107
    
    )
    
    Package hyperref Message: Driver (autodetected): hpdftex.
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\hyperref\hpdftex.def"
    File: hpdftex.def 2011/08/19 v6.82h Hyperref driver for pdfTeX
    
    \Fld@listcount=\count108
    \c@bookmark@seq@number=\count109
    
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\oberdiek\rerunfilecheck.sty"
    Package: rerunfilecheck 2011/04/15 v1.7 Rerun checks for auxiliary files (HO)
    Package uniquecounter Info: New unique counter `rerunfilecheck' on input line 2
    82.
    )
    
    \Hy@SectionHShift=\skip47
    
    )
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\natbib\natbib.sty
    Package: natbib 2010/09/13 8.31b (PWD, AO)
    
    \bibhang=\skip48
    \bibsep=\skip49
    
    LaTeX Info: Redefining \cite on input line 694.
    
    \c@NAT@ctr=\count110
    
    )
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\generic\babel\babel.sty"
    Package: babel 2008/07/08 v3.8m The Babel package
    
    *************************************
    * Local config file bblopts.cfg used
    *
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\00miktex\bblopts.cfg"
    File: bblopts.cfg 2006/07/31 v1.0 MiKTeX 'babel' configuration
    )
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\generic\babel\english.ldf"
    Language: english 2005/03/30 v3.3o English support from the babel system
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\generic\babel\babel.def"
    File: babel.def 2008/07/08 v3.8m Babel common definitions
    
    \babel@savecnt=\count111
    \U@D=\dimen121
    
    )
    \l@canadian = a dialect from \language\l@american 
    \l@australian = a dialect from \language\l@british 
    \l@newzealand = a dialect from \language\l@british 
    ))
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\preprint\authblk.sty
    Package: authblk 2009/11/18 1.3 (PWD)
    
    \affilsep=\skip50
    \@affilsep=\skip51
    \c@Maxaffil=\count112
    \c@authors=\count113
    \c@affil=\count114
    )
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\subfig\subfig.sty
    Package: subfig 2005/06/28 ver: 1.3 subfig package
    
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\caption\caption.sty
    Package: caption 2013/02/03 v3.3-65 Customizing captions (AR)
    
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\caption\caption3.sty
    Package: caption3 2013/02/03 v1.5-62 caption3 kernel (AR)
    \captionmargin=\dimen122
    \captionmargin@=\dimen123
    \captionwidth=\dimen124
    \caption@tempdima=\dimen125
    \caption@indent=\dimen126
    \caption@parindent=\dimen127
    \caption@hangindent=\dimen128
    )
    \c@ContinuedFloat=\count115
    Package caption Info: hyperref package is loaded.
    )
    \c@KVtest=\count116
    \sf@farskip=\skip52
    \sf@captopadj=\dimen129
    \sf@capskip=\skip53
    \sf@nearskip=\skip54
    \c@subfigure=\count117
    \c@subfigure@save=\count118
    \c@lofdepth=\count119
    \c@subtable=\count120
    \c@subtable@save=\count121
    \c@lotdepth=\count122
    \sf@top=\skip55
    \sf@bottom=\skip56
    ) (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\placeins\placeins.sty
    Package: placeins 2005/04/18  v 2.2
    ) (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\mdwtools\footnote.sty
    
    Package: footnote 1997/01/28 1.13 Save footnotes around boxes
    \fn@notes=\box28
    
    \fn@width=\dimen130
    ) ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\tools\tabularx.sty"
    Package: tabularx 1999/01/07 v2.07 `tabularx' package (DPC)
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\tools\array.sty"
    Package: array 2008/09/09 v2.4c Tabular extension package (FMi)
    \col@sep=\dimen131
    \extrarowheight=\dimen132
    \NC@list=\toks20
    \extratabsurround=\skip57
    \backup@length=\skip58
    )
    \TX@col@width=\dimen133
    \TX@old@table=\dimen134
    \TX@old@col=\dimen135
    \TX@target=\dimen136
    \TX@delta=\dimen137
    \TX@cols=\count123
    \TX@ftn=\toks21
    
    )
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\latex\upquote\upquote.sty
    Package: upquote 2012/04/19 v1.3 upright-quote and grave-accent glyphs in verba
    tim
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\base\textcomp.sty"
    Package: textcomp 2005/09/27 v1.99g Standard LaTeX package
    Package textcomp Info: Sub-encoding information:
    (textcomp)               5 = only ISO-Adobe without \textcurrency
    (textcomp)               4 = 5 + \texteuro
    (textcomp)               3 = 4 + \textohm
    (textcomp)               2 = 3 + \textestimated + \textcurrency
    (textcomp)               1 = TS1 - \textcircled - \t
    (textcomp)               0 = TS1 (full)
    (textcomp)             Font families with sub-encoding setting implement
    (textcomp)             only a restricted character set as indicated.
    (textcomp)             Family '?' is the default used for unknown fonts.
    (textcomp)             See the documentation for details.
    Package textcomp Info: Setting ? sub-encoding to TS1/1 on input line 71.
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\base\ts1enc.def"
    File: ts1enc.def 2001/06/05 v3.0e (jk/car/fm) Standard LaTeX file
    )
    LaTeX Info: Redefining \oldstylenums on input line 266.
    Package textcomp Info: Setting cmr sub-encoding to TS1/0 on input line 281.
    Package textcomp Info: Setting cmss sub-encoding to TS1/0 on input line 282.
    Package textcomp Info: Setting cmtt sub-encoding to TS1/0 on input line 283.
    Package textcomp Info: Setting cmvtt sub-encoding to TS1/0 on input line 284.
    Package textcomp Info: Setting cmbr sub-encoding to TS1/0 on input line 285.
    Package textcomp Info: Setting cmtl sub-encoding to TS1/0 on input line 286.
    Package textcomp Info: Setting ccr sub-encoding to TS1/0 on input line 287.
    Package textcomp Info: Setting ptm sub-encoding to TS1/4 on input line 288.
    Package textcomp Info: Setting pcr sub-encoding to TS1/4 on input line 289.
    Package textcomp Info: Setting phv sub-encoding to TS1/4 on input line 290.
    Package textcomp Info: Setting ppl sub-encoding to TS1/3 on input line 291.
    Package textcomp Info: Setting pag sub-encoding to TS1/4 on input line 292.
    Package textcomp Info: Setting pbk sub-encoding to TS1/4 on input line 293.
    Package textcomp Info: Setting pnc sub-encoding to TS1/4 on input line 294.
    Package textcomp Info: Setting pzc sub-encoding to TS1/4 on input line 295.
    Package textcomp Info: Setting bch sub-encoding to TS1/4 on input line 296.
    Package textcomp Info: Setting put sub-encoding to TS1/5 on input line 297.
    Package textcomp Info: Setting uag sub-encoding to TS1/5 on input line 298.
    Package textcomp Info: Setting ugq sub-encoding to TS1/5 on input line 299.
    Package textcomp Info: Setting ul8 sub-encoding to TS1/4 on input line 300.
    Package textcomp Info: Setting ul9 sub-encoding to TS1/4 on input line 301.
    Package textcomp Info: Setting augie sub-encoding to TS1/5 on input line 302.
    Package textcomp Info: Setting dayrom sub-encoding to TS1/3 on input line 303.
    Package textcomp Info: Setting dayroms sub-encoding to TS1/3 on input line 304.
    
    Package textcomp Info: Setting pxr sub-encoding to TS1/0 on input line 305.
    Package textcomp Info: Setting pxss sub-encoding to TS1/0 on input line 306.
    Package textcomp Info: Setting pxtt sub-encoding to TS1/0 on input line 307.
    Package textcomp Info: Setting txr sub-encoding to TS1/0 on input line 308.
    Package textcomp Info: Setting txss sub-encoding to TS1/0 on input line 309.
    Package textcomp Info: Setting txtt sub-encoding to TS1/0 on input line 310.
    Package textcomp Info: Setting lmr sub-encoding to TS1/0 on input line 311.
    Package textcomp Info: Setting lmdh sub-encoding to TS1/0 on input line 312.
    Package textcomp Info: Setting lmss sub-encoding to TS1/0 on input line 313.
    Package textcomp Info: Setting lmssq sub-encoding to TS1/0 on input line 314.
    Package textcomp Info: Setting lmvtt sub-encoding to TS1/0 on input line 315.
    Package textcomp Info: Setting qhv sub-encoding to TS1/0 on input line 316.
    Package textcomp Info: Setting qag sub-encoding to TS1/0 on input line 317.
    Package textcomp Info: Setting qbk sub-encoding to TS1/0 on input line 318.
    Package textcomp Info: Setting qcr sub-encoding to TS1/0 on input line 319.
    Package textcomp Info: Setting qcs sub-encoding to TS1/0 on input line 320.
    Package textcomp Info: Setting qpl sub-encoding to TS1/0 on input line 321.
    Package textcomp Info: Setting qtm sub-encoding to TS1/0 on input line 322.
    Package textcomp Info: Setting qzc sub-encoding to TS1/0 on input line 323.
    Package textcomp Info: Setting qhvc sub-encoding to TS1/0 on input line 324.
    Package textcomp Info: Setting futs sub-encoding to TS1/4 on input line 325.
    Package textcomp Info: Setting futx sub-encoding to TS1/4 on input line 326.
    Package textcomp Info: Setting futj sub-encoding to TS1/4 on input line 327.
    Package textcomp Info: Setting hlh sub-encoding to TS1/3 on input line 328.
    Package textcomp Info: Setting hls sub-encoding to TS1/3 on input line 329.
    Package textcomp Info: Setting hlst sub-encoding to TS1/3 on input line 330.
    Package textcomp Info: Setting hlct sub-encoding to TS1/5 on input line 331.
    Package textcomp Info: Setting hlx sub-encoding to TS1/5 on input line 332.
    Package textcomp Info: Setting hlce sub-encoding to TS1/5 on input line 333.
    Package textcomp Info: Setting hlcn sub-encoding to TS1/5 on input line 334.
    Package textcomp Info: Setting hlcw sub-encoding to TS1/5 on input line 335.
    Package textcomp Info: Setting hlcf sub-encoding to TS1/5 on input line 336.
    Package textcomp Info: Setting pplx sub-encoding to TS1/3 on input line 337.
    Package textcomp Info: Setting pplj sub-encoding to TS1/3 on input line 338.
    Package textcomp Info: Setting ptmx sub-encoding to TS1/4 on input line 339.
    Package textcomp Info: Setting ptmj sub-encoding to TS1/4 on input line 340.
    ))
    
    (D:\LADData\RCode\dataRetrieval\vignettes\dataRetrieval.aux)
    
    LaTeX Font Info:    Checking defaults for OML/cmm/m/it on input line 97.
    LaTeX Font Info:    ... okay on input line 97.
    LaTeX Font Info:    Checking defaults for T1/cmr/m/n on input line 97.
    LaTeX Font Info:    ... okay on input line 97.
    LaTeX Font Info:    Checking defaults for OT1/cmr/m/n on input line 97.
    LaTeX Font Info:    ... okay on input line 97.
    LaTeX Font Info:    Checking defaults for OMS/cmsy/m/n on input line 97.
    LaTeX Font Info:    ... okay on input line 97.
    LaTeX Font Info:    Checking defaults for OMX/cmex/m/n on input line 97.
    LaTeX Font Info:    ... okay on input line 97.
    LaTeX Font Info:    Checking defaults for U/cmr/m/n on input line 97.
    LaTeX Font Info:    ... okay on input line 97.
    LaTeX Font Info:    Checking defaults for PD1/pdf/m/n on input line 97.
    LaTeX Font Info:    ... okay on input line 97.
    LaTeX Font Info:    Checking defaults for TS1/cmr/m/n on input line 97.
    LaTeX Font Info:    Try loading font information for TS1+cmr on input line 97.
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\base\ts1cmr.fd"
    File: ts1cmr.fd 1999/05/25 v2.5h Standard LaTeX font definitions
    
    LaTeX Font Info:    ... okay on input line 97.
    LaTeX Font Info:    Try loading font information for OT1+ptm on input line 97.
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\psnfss\ot1ptm.fd"
    File: ot1ptm.fd 2001/06/04 font definitions for OT1/ptm.
    )
    (C:\Users\ldecicco\AppData\Roaming\MiKTeX\2.9\tex\context\base\supp-pdf.mkii
    [Loading MPS to PDF converter (version 2006.09.02).]
    \scratchcounter=\count124
    \scratchdimen=\dimen138
    \scratchbox=\box29
    \nofMPsegments=\count125
    \nofMParguments=\count126
    \everyMPshowfont=\toks22
    \MPscratchCnt=\count127
    \MPscratchDim=\dimen139
    \MPnumerator=\count128
    \makeMPintoPDFobject=\count129
    \everyMPtoPDFconversion=\toks23
    
    )
    \AtBeginShipoutBox=\box30
    
    Package hyperref Info: Link coloring OFF on input line 97.
    
     ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\hyperref\nameref.sty"
    
    Package: nameref 2010/04/30 v2.40 Cross-referencing by name of section
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\generic\oberdiek\gettitlestring.sty"
    Package: gettitlestring 2010/12/03 v1.4 Cleanup title references (HO)
    )
    
    \c@section@level=\count130
    
    LaTeX Info: Redefining \ref on input line 97.
    LaTeX Info: Redefining \pageref on input line 97.
    LaTeX Info: Redefining \nameref on input line 97.
    
    
    (D:\LADData\RCode\dataRetrieval\vignettes\dataRetrieval.out)
    (D:\LADData\RCode\dataRetrieval\vignettes\dataRetrieval.out)
    
    \@outlinefile=\write3
    Package caption Info: Begin \AtBeginDocument code.
    Package caption Info: subfig package v1.3 is loaded.
    Package caption Info: End \AtBeginDocument code.
    LaTeX Font Info:    Font shape `OT1/ptm/bx/n' in size <14.4> not available
    
    (Font)              Font shape `OT1/ptm/b/n' tried instead on input line 117.
    
    
    (D:\LADData\RCode\dataRetrieval\vignettes\dataRetrieval.toc
    
    LaTeX Font Info:    Font shape `OT1/ptm/bx/n' in size <10.95> not available
    (Font)              Font shape `OT1/ptm/b/n' tried instead on input line 2.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    [1
    
    {C:/Users/ldecicco/AppData/Local/MiKTeX/2.9/pdftex/config/pdftex.map}])
    
    \tf@toc=\write4
    
    LaTeX Font Info:    Try loading font information for OT1+pcr on input line 122.
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\psnfss\ot1pcr.fd"
    File: ot1pcr.fd 2001/06/04 font definitions for OT1/pcr.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 131.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    [2]
    
    LaTeX Font Info:    Font shape `OT1/pcr/bx/n' in size <10.95> not available
    
    (Font)              Font shape `OT1/pcr/b/n' tried instead on input line 133.
    
    LaTeX Font Info:    Font shape `OT1/pcr/m/it' in size <10.95> not available
    
    (Font)              Font shape `OT1/pcr/m/sl' tried instead on input line 134.
    
    LaTeX Font Info:    Font shape `OT1/ptm/bx/n' in size <12> not available
    
    (Font)              Font shape `OT1/ptm/b/n' tried instead on input line 168.
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 201.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Overfull \hbox (22.25568pt too wide) in paragraph at lines 237--238
    [][]$\OT1/pcr/m/n/10.95 http : / / nwis . waterdata . usgs . gov / nwis / help 
    / ?read _ file = stat&format = table$[] 
     []
    
    Package color Info: Redefining color shadecolor on input line 275.
    Package color Info: Redefining color shadecolor on input line 288.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Overfull \hbox (43.87282pt too wide) in paragraph at lines 298--299
    
    []\OT1/ptm/m/n/10.95 Site in-for-ma-tion is ob-tained from []$\OT1/pcr/m/n/10.9
    5 http : / / waterservices . usgs . gov / rest / Site-[]Test-[]Tool .$
     []
    
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 309.
    Package color Info: Redefining color shadecolor on input line 358.
    Package color Info: Redefining color shadecolor on input line 376.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Overfull \hbox (30.64148pt too wide) in paragraph at lines 386--387
    []\OT1/ptm/m/n/10.95 Parameter in-for-ma-tion is ob-tained from []$\OT1/pcr/m/n
    /10.95 http : / / nwis . waterdata . usgs . gov / nwis / pmcodes/$[] 
     []
    
    Package color Info: Redefining color shadecolor on input line 397.
    Package color Info: Redefining color shadecolor on input line 416.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 437.
    
    
    LaTeX Warning: No positions in optional float specifier.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
                   Default added (so using `tbp') on input line 454.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    <figure/getNWIStemperaturePlot.pdf, id=203, 505.89pt x 505.89pt>
    
    File: figure/getNWIStemperaturePlot.pdf Graphic file (type pdf)
    
    <use figure/getNWIStemperaturePlot.pdf>
    
    Package pdftex.def Info: figure/getNWIStemperaturePlot.pdf used on input line 4
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    56.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    (pdftex.def)             Requested size: 448.07928pt x 448.07928pt.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [8]
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    [9 <D:/LADData/RCode/dataRetrieval/vignettes/figure/getNWIStemperaturePlot.pdf>
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 475.
    Package color Info: Redefining color shadecolor on input line 488.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [10]
    Package color Info: Redefining color shadecolor on input line 524.
    Package color Info: Redefining color shadecolor on input line 548.
    
    LaTeX Warning: No positions in optional float specifier.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
                   Default added (so using `tbp') on input line 557.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    <figure/getQWtemperaturePlot.pdf, id=228, 505.89pt x 505.89pt>
    
    File: figure/getQWtemperaturePlot.pdf Graphic file (type pdf)
    
    <use figure/getQWtemperaturePlot.pdf>
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package pdftex.def Info: figure/getQWtemperaturePlot.pdf used on input line 559
    
    .
    (pdftex.def)             Requested size: 448.07378pt x 448.07928pt.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [11]
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [12 <D:/LADData/RCode/dataRetrieval/vignettes/figure/getQWtemperaturePlot.pdf>]
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Overfull \hbox (50.793pt too wide) in paragraph at lines 572--573
    
    \OT1/ptm/m/n/10.95 There are ad-di-tional data sets avail-able on the Wa-ter Qu
    al-ity Data Por-tal ([]$\OT1/pcr/m/n/10.95 http : / / www . waterqualitydata .$
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 575.
    LaTeX Font Info:    Try loading font information for TS1+pcr on input line 577.
    
    ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\psnfss\ts1pcr.fd"
    File: ts1pcr.fd 2001/06/04 font definitions for TS1/pcr.
    )
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 610.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Overfull \hbox (5.25568pt too wide) in paragraph at lines 619--619
    
    [][]\OT1/pcr/m/n/10.95 url_uv[] []<-[] []\OT1/pcr/b/n/10.95 constructNWISURL[][
    ]\OT1/pcr/m/n/10.95 (siteNumber,[][]"00060"[][],startDate,endDate,[][]\TS1/pcr/
    m/n/10.95 '\OT1/pcr/m/n/10.95 uv\TS1/pcr/m/n/10.95 '[][]\OT1/pcr/m/n/10.95 )[][
    ] 
    
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 640.
    Package color Info: Redefining color shadecolor on input line 658.
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 713.
    Package color Info: Redefining color shadecolor on input line 726.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 820.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 876.
    LaTeX Font Info:    Try loading font information for OMS+pcr on input line 881.
    
     ("C:\Program Files (x86)\MiKTeX 2.9\tex\latex\psnfss\omspcr.fd"
    File: omspcr.fd 
    )
    LaTeX Font Info:    Font shape `OMS/pcr/m/n' in size <10.95> not available
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    (Font)              Font shape `OMS/cmsy/m/n' tried instead on input line 881.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 905.
    Package color Info: Redefining color shadecolor on input line 929.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    [19]
    Package color Info: Redefining color shadecolor on input line 950.
    
    Overfull \hbox (44.67563pt too wide) in paragraph at lines 975--975
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [] \OT1/pcr/m/n/10.95 First day of the discharge record is 2000-01-01 and last 
    day is 2013-01-01[] 
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Overfull \hbox (44.67563pt too wide) in paragraph at lines 975--975
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [] \OT1/pcr/m/n/10.95 The first sample is from 2000-01-04 and the last sample i
    s from 2012-12-18[] 
    
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [20]
    Package color Info: Redefining color shadecolor on input line 1007.
    
    
    
    LaTeX Warning: No positions in optional float specifier.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
                   Default added (so using `tbp') on input line 1013.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    <figure/egretEx.pdf, id=288, 505.89pt x 505.89pt>
    
    File: figure/egretEx.pdf Graphic file (type pdf)
     <use figure/egretEx.pdf>
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package pdftex.def Info: figure/egretEx.pdf used on input line 1015.
    
    (pdftex.def)             Requested size: 448.07378pt x 448.07928pt.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [21]
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [22 <D:/LADData/RCode/dataRetrieval/vignettes/figure/egretEx.pdf>]
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [23
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [24]
    Package color Info: Redefining color shadecolor on input line 1120.
    Package color Info: Redefining color shadecolor on input line 1130.
    Package color Info: Redefining color shadecolor on input line 1149.
    Package color Info: Redefining color shadecolor on input line 1164.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [25
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Overfull \hbox (157.60596pt too wide) in paragraph at lines 1173--1174
    
    \OT1/ptm/m/n/10.95 C:/Users/userA/Documents/R/win-library/2.15/dataRetrieval, a
    nd the de-fault for a Mac: /Users/userA/Library/R/2.15/library/dataRetrieval.
     []
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 1177.
    Package color Info: Redefining color shadecolor on input line 1193.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package color Info: Redefining color shadecolor on input line 1231.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Overfull \hbox (11.82567pt too wide) in paragraph at lines 1249--1249
    
    []\OT1/pcr/m/n/10.95 Suspended sediment concentration (SSC) 1980-10-01 1991-09-
    30 3651 mg/l[] 
     []
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    <table1.png, id=326, 554.07pt x 125.71968pt>
    
    File: table1.png Graphic file (type png)
     <use table1.png>
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package pdftex.def Info: table1.png used on input line 1268.
    
    (pdftex.def)             Requested size: 554.06865pt x 125.71936pt.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [27]
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    [28 <D:/LADData/RCode/dataRetrieval/vignettes/table1.png>]
    Underfull \hbox (badness 1983) in paragraph at lines 1284--1285
    
    []\OT1/ptm/m/n/10.95 Hirsch, R. M., Moyer, D. L. and Arch-field, S. A. (2010), 
    Weighted Re-gres-sions on
     []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Underfull \hbox (badness 1221) in paragraph at lines 1284--1285
    
    \OT1/ptm/m/n/10.95 Time, Dis-charge, and Sea-son (WRTDS), with an Ap-pli-ca-tio
    n to Chesa-peake Bay River
     []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Underfull \hbox (badness 2443) in paragraph at lines 1284--1285
    
    \OT1/ptm/m/n/10.95 In-puts. JAWRA Jour-nal of the Amer-i-can Wa-ter Re-sources 
    As-so-ci-a-tion, 46: 857-880.
     []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Underfull \hbox (badness 3690) in paragraph at lines 1284--1285
    
    \OT1/ptm/m/n/10.95 doi: 10.1111/j.1752-1688.2010.00482.x []$\OT1/pcr/m/n/10.95 
    http : / / onlinelibrary . wiley . com / doi /$
     []
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package atveryend Info: Empty hook `BeforeClearDocument' on input line 1291.
    
    
    Overfull \vbox (21.68121pt too high) has occurred while \output is active []
    
    
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    [29
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package atveryend Info: Empty hook `AfterLastShipout' on input line 1291.
    
     (D:\LADData\RCode\dataRetrieval\vignettes\dataRetrieval.aux)
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Package atveryend Info: Executing hook `AtVeryEndDocument' on input line 1291.
    Package atveryend Info: Executing hook `AtEndAfterFileList' on input line 1291.
    
    
    Package rerunfilecheck Info: File `dataRetrieval.out' has not changed.
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    (rerunfilecheck)             Checksum: FA68DD2EA4402D1A5C9FB76C153FCB7A;1868.
    
     ) 
    Here is how much of TeX's memory you used:
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
     8245 strings out of 494045
     123107 string characters out of 3145961
     215137 words of memory out of 3000000
     11320 multiletter control sequences out of 15000+200000
    
     30981 words of font info for 68 fonts, out of 3000000 for 9000
    
     715 hyphenation exceptions out of 8191
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
     44i,15n,42p,905b,411s stack positions out of 5000i,500n,10000p,200000b,50000s
    
    {C:/Program Files (x86)/MiKTeX 2.9/fonts/enc/dvips/fontname/8r.enc}<C:/Progra
    m Files (x86)/MiKTeX 2.9/fonts/type1/public/amsfonts/cm/cmmi10.pfb><C:/Program 
    Files (x86)/MiKTeX 2.9/fonts/type1/public/amsfonts/cm/cmsy10.pfb><C:/Program Fi
    les (x86)/MiKTeX 2.9/fonts/type1/urw/courier/ucrb8a.pfb><C:/Program Files (x86)
    /MiKTeX 2.9/fonts/type1/urw/courier/ucrr8a.pfb><C:/Program Files (x86)/MiKTeX 2
    
    .9/fonts/type1/urw/courier/ucrro8a.pfb><C:/Program Files (x86)/MiKTeX 2.9/fonts
    /type1/urw/times/utmb8a.pfb><C:/Program Files (x86)/MiKTeX 2.9/fonts/type1/urw/
    times/utmr8a.pfb><C:/Program Files (x86)/MiKTeX 2.9/fonts/type1/urw/times/utmri
    8a.pfb>
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
    Output written on dataRetrieval.pdf (29 pages, 286191 bytes).
    
    PDF statistics:
    
    Laura A DeCicco's avatar
    Laura A DeCicco committed
     408 PDF objects out of 1000 (max. 8388607)
     84 named destinations out of 1000 (max. 500000)
     237 words of extra memory for PDF output out of 10000 (max. 10000000)